Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 AC008269.2-201ENST00000561915 1105 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 MIR4276-201ENST00000584832 70 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 AC009318.2-201ENST00000610917 651 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 HMGB1P24-202ENST00000615653 685 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 AC009541.1-201ENST00000438279 2662 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 Y_RNA.48-201ENST00000362710 103 ntBASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 Y_RNA.510-201ENST00000384511 114 ntBASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 Y_RNA.533-201ENST00000384596 114 ntBASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 Y_RNA.557-201ENST00000384680 107 ntBASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 Y_RNA.645-201ENST00000391229 102 ntBASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 MIR1289-1-201ENST00000408836 144 ntBASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 AC008267.5-201ENST00000424928 265 ntBASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 AC006028.1-201ENST00000438379 402 ntBASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 HMGN1P18-201ENST00000457642 277 ntBASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 RPS26P21-201ENST00000475397 348 ntBASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 RNA5SP341-201ENST00000516261 117 ntBASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 RNU6-764P-201ENST00000516396 105 ntBASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 LARP7P3-201ENST00000579888 337 ntBASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 AC087588.2-201ENST00000617667 426 ntBASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 AL162373.1-201ENST00000620433 407 ntBASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHB1Q9Y5F3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 RNU6-142P-201ENST00000384019 107 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 RNU6-1222P-201ENST00000384615 107 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 MIR544A-201ENST00000384855 91 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 MIR147B-201ENST00000390185 80 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 RNU6-700P-201ENST00000391043 107 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 MTCYBP2-201ENST00000407745 171 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 MTCYBP9-201ENST00000431021 303 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 AL513124.1-201ENST00000450410 614 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 AC079354.2-201ENST00000453523 154 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 RN7SKP210-201ENST00000459176 261 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 AP001025.1-201ENST00000486139 332 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 MIR5004-201ENST00000579078 107 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 AL158827.2-201ENST00000602494 330 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 AC104695.3-201ENST00000604052 296 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 AC096772.1-201ENST00000609146 564 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 AC099778.2-201ENST00000610904 211 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 uc_338.1-201ENST00000612113 180 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 AC092628.2-201ENST00000622492 339 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 AC073476.4-201ENST00000628409 72 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 AL691447.3-201ENST00000635020 330 ntBASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHB1Q9Y5F3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 RBBP8P1-201ENST00000449447 1844 ntBASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 RNU6-1141P-201ENST00000364520 107 ntBASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 RNU6-450P-201ENST00000364654 107 ntBASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 MIR767-201ENST00000390228 109 ntBASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 AL357075.1-201ENST00000404107 726 ntBASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 COTL1P1-201ENST00000422309 375 ntBASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 MTCYBP10-201ENST00000424905 650 ntBASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 AL353997.1-201ENST00000432936 108 ntBASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 CST9LP2-201ENST00000437612 320 ntBASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 AL031659.1-201ENST00000447075 539 ntBASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 RPL30P10-201ENST00000488148 337 ntBASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 RNU7-4P-201ENST00000516961 62 ntBASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 IGHV3-76-201ENST00000522465 295 ntBASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 AL391813.1-201ENST00000603098 260 ntBASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 SNORA50A-202ENST00000629536 136 ntBASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 MIR7153-201ENST00000637758 57 ntBASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 Z83843.1-201ENST00000604070 3685 ntBASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHB1Q9Y5F3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
PCDHB1Q9Y5F3 AC002543.1-201ENST00000299783 1954 ntBASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 RNU6-799P-201ENST00000363567 107 ntBASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 Y_RNA.153-201ENST00000363615 91 ntBASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 Y_RNA.193-201ENST00000363979 102 ntBASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 RNU6-622P-201ENST00000384272 103 ntBASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 RNU6-1156P-201ENST00000410365 100 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms