Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 AC093534.1-201ENST00000504977 132 ntBASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 BNIP3P8-201ENST00000597863 560 ntBASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 AC068620.3-201ENST00000602749 560 ntBASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 AP001981.2-201ENST00000603241 418 ntBASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 DPPA3P3-201ENST00000603842 430 ntBASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 AL358072.1-201ENST00000604156 575 ntBASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 AC090617.9-201ENST00000623751 147 ntBASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 RNU6-862P-201ENST00000362804 105 ntBASIC-0.17□□□□□ -2.44
AP4S1Q9Y587 SNORA36.2-201ENST00000384004 127 ntBASIC-0.17□□□□□ -2.44
AP4S1Q9Y587 RNU6-843P-201ENST00000384454 104 ntBASIC-0.17□□□□□ -2.44
AP4S1Q9Y587 RNU6-1005P-201ENST00000384519 107 ntBASIC-0.17□□□□□ -2.44
AP4S1Q9Y587 UBE2V1P11-201ENST00000411559 285 ntBASIC-0.17□□□□□ -2.44
AP4S1Q9Y587 RPL23AP95-201ENST00000426806 265 ntBASIC-0.17□□□□□ -2.44
AP4S1Q9Y587 AC073910.1-201ENST00000445047 438 ntBASIC-0.17□□□□□ -2.44
AP4S1Q9Y587 AC118282.2-201ENST00000508739 374 ntBASIC-0.17□□□□□ -2.44
AP4S1Q9Y587 AC011979.2-201ENST00000527568 352 ntBASIC-0.17□□□□□ -2.44
AP4S1Q9Y587 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.17□□□□□ -2.44
AP4S1Q9Y587 EIF1P4-201ENST00000572664 335 ntBASIC-0.17□□□□□ -2.44
AP4S1Q9Y587 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-0.17□□□□□ -2.44
AP4S1Q9Y587 AL162730.1-201ENST00000605734 292 ntBASIC-0.17□□□□□ -2.44
AP4S1Q9Y587 AC007792.1-201ENST00000623023 402 ntBASIC-0.17□□□□□ -2.44
AP4S1Q9Y587 RNU6-858P-201ENST00000362436 107 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 RNU6-487P-201ENST00000365430 104 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 RNU6-622P-201ENST00000384272 103 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 RNA5SP219-201ENST00000390940 113 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 SNORA16.2-201ENST00000390991 127 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 AL355796.1-201ENST00000406706 323 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 ELOCP9-201ENST00000418624 239 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 FTH1P25-201ENST00000447665 469 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 AC104629.1-201ENST00000494226 508 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 AC110760.3-202ENST00000515177 371 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 AC009902.1-201ENST00000519351 183 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 OR6C7P-201ENST00000547875 934 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 MIR4709-201ENST00000577272 72 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 BNIP3P30-201ENST00000601184 574 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 AL391001.1-201ENST00000602747 715 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 AL390208.1-201ENST00000605885 644 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 AC010487.4-201ENST00000637027 61 ntBASIC-0.18□□□□□ -2.44
AP4S1Q9Y587 SNORD114-9-201ENST00000364370 72 ntBASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 AL133264.1-201ENST00000407157 562 ntBASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 RNA5SP222-201ENST00000411039 105 ntBASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 AC123900.1-201ENST00000420390 96 ntBASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 SNRPGP12-201ENST00000449481 213 ntBASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 Y_RNA.638-201ENST00000459374 113 ntBASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 MTND1P22-201ENST00000510572 951 ntBASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 MIR5695-201ENST00000579717 85 ntBASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 AC025627.3-201ENST00000582078 182 ntBASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 SNORA4-201ENST00000584302 138 ntBASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 AC084824.4-201ENST00000620106 731 ntBASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 MIR371B-201ENST00000638082 66 ntBASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 CASC19-280ENST00000642102 1351 ntBASIC-0.19□□□□□ -2.44
AP4S1Q9Y587 RNU6-839P-201ENST00000363347 108 ntBASIC-0.2□□□□□ -2.44
AP4S1Q9Y587 RNU2-23P-201ENST00000410545 195 ntBASIC-0.2□□□□□ -2.44
AP4S1Q9Y587 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.2□□□□□ -2.44
AP4S1Q9Y587 MTCO3P29-201ENST00000432119 779 ntBASIC-0.2□□□□□ -2.44
AP4S1Q9Y587 AC005094.1-201ENST00000440420 368 ntBASIC-0.2□□□□□ -2.44
AP4S1Q9Y587 MTCO3P45-201ENST00000443036 613 ntBASIC-0.2□□□□□ -2.44
AP4S1Q9Y587 AC092991.1-201ENST00000477176 376 ntBASIC-0.2□□□□□ -2.44
AP4S1Q9Y587 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC-0.2□□□□□ -2.44
AP4S1Q9Y587 RNU6-390P-201ENST00000516259 103 ntBASIC-0.2□□□□□ -2.44
AP4S1Q9Y587 RNU6-572P-201ENST00000516724 80 ntBASIC-0.2□□□□□ -2.44
AP4S1Q9Y587 RN7SKP258-201ENST00000517151 304 ntBASIC-0.2□□□□□ -2.44
AP4S1Q9Y587 AC091163.3-201ENST00000518269 1144 ntBASIC-0.2□□□□□ -2.44
AP4S1Q9Y587 AC073349.3-201ENST00000617616 186 ntBASIC-0.2□□□□□ -2.44
AP4S1Q9Y587 AC009268.2-201ENST00000621925 457 ntBASIC-0.2□□□□□ -2.44
AP4S1Q9Y587 OR5AK4P-201ENST00000635912 903 ntBASIC-0.2□□□□□ -2.44
AP4S1Q9Y587 RNA5SP62-201ENST00000363457 110 ntBASIC-0.21□□□□□ -2.44
AP4S1Q9Y587 RNU6-40P-201ENST00000384254 107 ntBASIC-0.21□□□□□ -2.44
AP4S1Q9Y587 RNU6-163P-201ENST00000384396 106 ntBASIC-0.21□□□□□ -2.44
AP4S1Q9Y587 TPMTP2-201ENST00000414372 726 ntBASIC-0.21□□□□□ -2.44
AP4S1Q9Y587 COX7BP2-201ENST00000437976 242 ntBASIC-0.21□□□□□ -2.44
AP4S1Q9Y587 RNU7-90P-201ENST00000459216 62 ntBASIC-0.21□□□□□ -2.44
AP4S1Q9Y587 RPL37P6-201ENST00000460682 294 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms