Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 MIR5692C2-201ENST00000577959 77 ntBASIC4.55□□□□□ -1.68
NOD1Q9Y239 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.55□□□□□ -1.68
NOD1Q9Y239 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NOD1Q9Y239 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
NOD1Q9Y239 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
NOD1Q9Y239 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.54□□□□□ -1.68
NOD1Q9Y239 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NOD1Q9Y239 AL133383.2-201ENST00000622958 2336 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NOD1Q9Y239 AC004944.1-201ENST00000517807 3059 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 SNORA71.3-201ENST00000362582 128 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 SNORD46.1-201ENST00000364139 104 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 MIR449B-201ENST00000384995 97 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 U3.26-201ENST00000391236 204 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 AL357139.1-201ENST00000407792 426 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 RNU6-1199P-201ENST00000411249 104 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.54□□□□□ -1.68
NOD1Q9Y239 AC006517.1-201ENST00000480485 328 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 AIG1P1-201ENST00000503376 148 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 HMGB3P3-201ENST00000510526 400 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.54□□□□□ -1.68
NOD1Q9Y239 MIR3609-201ENST00000582661 80 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 MIR3136-201ENST00000583498 78 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 AL356575.1-201ENST00000603008 283 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 AL162713.1-201ENST00000604480 262 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 LINC00901.1-201ENST00000617252 152 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 MIR7151-201ENST00000617477 60 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.54□□□□□ -1.68
NOD1Q9Y239 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NOD1Q9Y239 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.54□□□□□ -1.68
NOD1Q9Y239 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NOD1Q9Y239 AC106871.1-201ENST00000568324 3102 ntBASIC4.53□□□□□ -1.68
NOD1Q9Y239 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
NOD1Q9Y239 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NOD1Q9Y239 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
NOD1Q9Y239 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
NOD1Q9Y239 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.53□□□□□ -1.68
NOD1Q9Y239 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NOD1Q9Y239 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NOD1Q9Y239 RNU6-653P-201ENST00000363074 106 ntBASIC4.53□□□□□ -1.68
NOD1Q9Y239 AL133412.1-201ENST00000380194 2992 ntBASIC4.53□□□□□ -1.68
NOD1Q9Y239 Y_RNA.441-201ENST00000384123 112 ntBASIC4.53□□□□□ -1.68
NOD1Q9Y239 MIR320B2-201ENST00000408479 138 ntBASIC4.53□□□□□ -1.68
NOD1Q9Y239 SNORA57.3-201ENST00000411095 141 ntBASIC4.53□□□□□ -1.68
NOD1Q9Y239 RN7SKP53-201ENST00000411337 315 ntBASIC4.53□□□□□ -1.68
NOD1Q9Y239 AL160275.2-201ENST00000412010 394 ntBASIC4.53□□□□□ -1.68
NOD1Q9Y239 AL591419.1-201ENST00000427423 339 ntBASIC4.53□□□□□ -1.68
NOD1Q9Y239 YME1L1P1-201ENST00000429435 297 ntBASIC4.53□□□□□ -1.68
NOD1Q9Y239 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.53□□□□□ -1.68
NOD1Q9Y239 RPS15AP5-201ENST00000436276 388 ntBASIC4.53□□□□□ -1.68
NOD1Q9Y239 AL500522.2-201ENST00000448562 343 ntBASIC4.53□□□□□ -1.68
NOD1Q9Y239 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.53□□□□□ -1.68
NOD1Q9Y239 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.53□□□□□ -1.68
NOD1Q9Y239 AC025627.2-201ENST00000576220 160 ntBASIC4.53□□□□□ -1.68
NOD1Q9Y239 MIR5684-201ENST00000585074 65 ntBASIC4.53□□□□□ -1.68
NOD1Q9Y239 DEFB117-201ENST00000602356 141 ntBASIC4.53□□□□□ -1.68
NOD1Q9Y239 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.53□□□□□ -1.68
NOD1Q9Y239 AL138721.1-201ENST00000616756 179 ntBASIC4.53□□□□□ -1.68
NOD1Q9Y239 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
NOD1Q9Y239 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.53□□□□□ -1.68
NOD1Q9Y239 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
NOD1Q9Y239 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NOD1Q9Y239 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
NOD1Q9Y239 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
NOD1Q9Y239 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NOD1Q9Y239 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NOD1Q9Y239 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
NOD1Q9Y239 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NOD1Q9Y239 AL592182.3-201ENST00000642132 3304 ntBASIC4.52□□□□□ -1.69
NOD1Q9Y239 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NOD1Q9Y239 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.52□□□□□ -1.69
NOD1Q9Y239 RNU1-62P-201ENST00000362599 164 ntBASIC4.52□□□□□ -1.69
NOD1Q9Y239 RNA5SP387-201ENST00000364226 106 ntBASIC4.52□□□□□ -1.69
NOD1Q9Y239 RNU2-54P-201ENST00000410299 190 ntBASIC4.52□□□□□ -1.69
NOD1Q9Y239 RNA5SP475-201ENST00000410568 110 ntBASIC4.52□□□□□ -1.69
NOD1Q9Y239 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.52□□□□□ -1.69
NOD1Q9Y239 snoU13.28-201ENST00000459235 104 ntBASIC4.52□□□□□ -1.69
NOD1Q9Y239 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.52□□□□□ -1.69
NOD1Q9Y239 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.52□□□□□ -1.69
NOD1Q9Y239 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.52□□□□□ -1.69
NOD1Q9Y239 AC105137.2-201ENST00000569073 466 ntBASIC4.52□□□□□ -1.69
NOD1Q9Y239 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NOD1Q9Y239 SNRPGP20-201ENST00000604477 205 ntBASIC4.52□□□□□ -1.69
NOD1Q9Y239 MIR6868-201ENST00000611215 58 ntBASIC4.52□□□□□ -1.69
NOD1Q9Y239 AC084757.4-201ENST00000616350 526 ntBASIC4.52□□□□□ -1.69
NOD1Q9Y239 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.52□□□□□ -1.69
NOD1Q9Y239 MIR3674-201ENST00000636576 68 ntBASIC4.52□□□□□ -1.69
NOD1Q9Y239 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NOD1Q9Y239 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.52□□□□□ -1.69
NOD1Q9Y239 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NOD1Q9Y239 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NOD1Q9Y239 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NOD1Q9Y239 SNORD35B-201ENST00000363660 87 ntBASIC4.51□□□□□ -1.69
NOD1Q9Y239 RNA5SP22-201ENST00000365393 109 ntBASIC4.51□□□□□ -1.69
NOD1Q9Y239 SNORA18.3-201ENST00000384122 132 ntBASIC4.51□□□□□ -1.69
NOD1Q9Y239 MIR7-3-201ENST00000384898 110 ntBASIC4.51□□□□□ -1.69
NOD1Q9Y239 SNORD96B-201ENST00000386148 79 ntBASIC4.51□□□□□ -1.69
NOD1Q9Y239 SNORA40.19-201ENST00000390846 128 ntBASIC4.51□□□□□ -1.69
NOD1Q9Y239 MIR1271-201ENST00000408537 86 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms