Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AP000942.3-201ENST00000603702 160 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 AL031281.1-201ENST00000604049 488 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 AC073413.2-201ENST00000604332 360 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 AC123912.5-201ENST00000605470 343 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 AL157834.3-201ENST00000615543 103 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 RMST_4.1-201ENST00000616886 107 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 AL359757.2-201ENST00000624309 274 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 AL445984.1-201ENST00000637834 659 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 Y_RNA.22-201ENST00000362492 102 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 SNORD1A-201ENST00000364968 72 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 RNU5E-7P-201ENST00000365290 117 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 RNU6-61P-201ENST00000365528 109 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 RNU6-1222P-201ENST00000384615 107 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 MIR558-201ENST00000384920 94 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 RNU2-3P-201ENST00000410144 191 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 RNU2-39P-201ENST00000410604 198 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 RNA5SP111-201ENST00000411386 101 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 CYCSP33-201ENST00000414485 327 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 RPS27P16-201ENST00000425758 201 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 MTND1P30-201ENST00000441241 901 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 RPS29P28-201ENST00000446439 141 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 FTH1P25-201ENST00000447665 469 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 AC245517.4-201ENST00000448601 281 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 RNU1-131P-201ENST00000458943 161 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 MTCO2P29-201ENST00000465212 189 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 AL049829.1-201ENST00000465411 156 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 RPS26P55-201ENST00000471178 356 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 AC145146.1-201ENST00000496370 254 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 RNA5SP445-201ENST00000515889 115 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 RNU6-902P-201ENST00000517212 91 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 MIR4999-201ENST00000585029 91 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 VN1R80P-201ENST00000597126 338 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 AL031775.1-201ENST00000607014 887 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 AC092140.2-201ENST00000618027 521 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 AL359740.1-201ENST00000624340 592 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 MTND5P9-201ENST00000503854 1755 ntBASIC0.87□□□□□ -2.27
HHLA3Q9XRX5 AC245060.5-201ENST00000610778 3293 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 RNU6-527P-201ENST00000363425 104 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 RNU4-91P-201ENST00000364778 135 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 MIR1285-1-201ENST00000408593 84 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 MIR1267-201ENST00000408723 78 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 C1DP2-201ENST00000418167 426 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 RPL21P111-201ENST00000418453 477 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 MTCO2P23-201ENST00000425216 680 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 AL589872.1-201ENST00000426602 288 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 AC137499.1-201ENST00000427602 88 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 MED13P1-201ENST00000428342 171 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 AL591043.1-201ENST00000432461 424 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 AC119618.1-201ENST00000434191 222 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 UBE2V1P8-201ENST00000437166 265 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 RPS24P1-201ENST00000438550 371 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 AC004223.1-201ENST00000479840 271 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 RPL26P26-201ENST00000480251 434 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 UBE2V1P12-201ENST00000503954 474 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 AC108078.1-201ENST00000508073 725 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 AC097473.1-201ENST00000508142 408 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 AC117522.1-201ENST00000509821 380 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 AF131216.2-201ENST00000512316 564 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 RNU5A-4P-201ENST00000516588 111 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 MTND4P33-201ENST00000556706 766 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 AC090888.2-201ENST00000559765 1144 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 AC005668.1-201ENST00000571142 476 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 MIR5697-201ENST00000578045 78 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 MIR3660-201ENST00000584845 100 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 RNU6-87P-201ENST00000607561 108 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 AC010608.3-201ENST00000625048 527 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 AC095038.3-201ENST00000634439 195 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 U4.7-201ENST00000638126 106 ntBASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
HHLA3Q9XRX5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
HHLA3Q9XRX5 RNU5F-6P-201ENST00000362979 116 ntBASIC0.85□□□□□ -2.27
HHLA3Q9XRX5 RNU6-414P-201ENST00000363705 104 ntBASIC0.85□□□□□ -2.27
HHLA3Q9XRX5 RNU6-641P-201ENST00000384006 107 ntBASIC0.85□□□□□ -2.27
HHLA3Q9XRX5 Y_RNA.608-201ENST00000410647 95 ntBASIC0.85□□□□□ -2.27
HHLA3Q9XRX5 AC123900.1-201ENST00000420390 96 ntBASIC0.85□□□□□ -2.27
HHLA3Q9XRX5 AL591704.2-201ENST00000421658 181 ntBASIC0.85□□□□□ -2.27
HHLA3Q9XRX5 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HHLA3Q9XRX5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HHLA3Q9XRX5 AL135790.2-201ENST00000437701 267 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms