Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 RPS27P22-201ENST00000478056 241 ntBASIC0.69□□□□□ -2.3
SCN8AQ9UQD0 AC117454.1-201ENST00000491120 168 ntBASIC0.69□□□□□ -2.3
SCN8AQ9UQD0 AC005741.1-201ENST00000511094 432 ntBASIC0.69□□□□□ -2.3
SCN8AQ9UQD0 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.69□□□□□ -2.3
SCN8AQ9UQD0 RNVU1-2-201ENST00000516326 135 ntBASIC0.69□□□□□ -2.3
SCN8AQ9UQD0 MIR5094-201ENST00000578766 85 ntBASIC0.69□□□□□ -2.3
SCN8AQ9UQD0 AC005776.1-201ENST00000603164 290 ntBASIC0.69□□□□□ -2.3
SCN8AQ9UQD0 AC092656.1-203ENST00000624134 423 ntBASIC0.69□□□□□ -2.3
SCN8AQ9UQD0 MIR302D-201ENST00000362275 68 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 RNU6-23P-201ENST00000363283 107 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 RNU1-36P-201ENST00000365130 165 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 RNU6-438P-201ENST00000365561 103 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 Y_RNA.374-201ENST00000365606 101 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 RNU6-72P-201ENST00000384285 79 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 SNORA25-201ENST00000384384 134 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 MIR19B1-201ENST00000384829 87 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 MTCYBP5-201ENST00000423752 1135 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 CR769776.1-201ENST00000441254 787 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 AC068587.4-201ENST00000533893 186 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 AP003465.2-201ENST00000602571 373 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 AC022893.3-201ENST00000607665 437 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 SNORA4.3-201ENST00000365564 137 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 RN7SKP266-201ENST00000410232 287 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 AC027119.1-201ENST00000440877 241 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 AC130509.1-201ENST00000464158 433 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 AC092989.1-201ENST00000481235 277 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 MTND1P36-201ENST00000522384 936 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 AC137800.2-201ENST00000574375 120 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 MIR1273G-201ENST00000577677 100 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 SNORA77B-201ENST00000578179 125 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 AC008751.2-201ENST00000597885 980 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 AC069114.2-201ENST00000604699 304 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 AP000860.1-201ENST00000605250 559 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 AP002802.2-201ENST00000605877 235 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 AC012676.2-201ENST00000619258 186 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 AC022513.1-201ENST00000624512 117 ntBASIC0.68□□□□□ -2.3
SCN8AQ9UQD0 RNA5SP257-201ENST00000363023 116 ntBASIC0.67□□□□□ -2.3
SCN8AQ9UQD0 RNU5E-6P-201ENST00000365574 115 ntBASIC0.67□□□□□ -2.3
SCN8AQ9UQD0 RNU6-1176P-201ENST00000390955 107 ntBASIC0.67□□□□□ -2.3
SCN8AQ9UQD0 SNORA12-201ENST00000391162 147 ntBASIC0.67□□□□□ -2.3
SCN8AQ9UQD0 AL590556.1-201ENST00000423231 483 ntBASIC0.67□□□□□ -2.3
SCN8AQ9UQD0 NDUFB1P2-201ENST00000449477 176 ntBASIC0.67□□□□□ -2.3
SCN8AQ9UQD0 RNU1-131P-201ENST00000458943 161 ntBASIC0.67□□□□□ -2.3
SCN8AQ9UQD0 AC108078.1-201ENST00000508073 725 ntBASIC0.67□□□□□ -2.3
SCN8AQ9UQD0 RNU6-229P-201ENST00000516614 102 ntBASIC0.67□□□□□ -2.3
SCN8AQ9UQD0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.67□□□□□ -2.3
SCN8AQ9UQD0 AL512310.8-201ENST00000550183 120 ntBASIC0.67□□□□□ -2.3
SCN8AQ9UQD0 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.67□□□□□ -2.3
SCN8AQ9UQD0 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.67□□□□□ -2.3
SCN8AQ9UQD0 AC112220.2-201ENST00000605513 533 ntBASIC0.67□□□□□ -2.3
SCN8AQ9UQD0 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.67□□□□□ -2.3
SCN8AQ9UQD0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.67□□□□□ -2.3
SCN8AQ9UQD0 AL138955.1-201ENST00000622881 1040 ntBASIC0.67□□□□□ -2.3
SCN8AQ9UQD0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 MIR301A-201ENST00000385261 86 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 RN7SKP61-201ENST00000410642 295 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AP000542.1-201ENST00000448473 371 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AL583843.1-201ENST00000456070 346 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 RNU6-953P-201ENST00000459154 107 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AC011005.2-201ENST00000487324 359 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AC134050.1-201ENST00000495088 933 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 MTCO3P9-201ENST00000506989 781 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 Y_RNA.689-201ENST00000516589 107 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AC133485.1-201ENST00000567176 124 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AC138907.6-201ENST00000568401 126 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AC099785.1-201ENST00000605697 437 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AC130324.3-201ENST00000614165 542 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AL359547.2-201ENST00000615810 418 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AL158163.2-201ENST00000619110 700 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AL356094.1-201ENST00000624663 1212 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 MIR1248-201ENST00000629190 106 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 RNU6-862P-201ENST00000362804 105 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 RNA5SP499-201ENST00000363982 119 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 SNORA72.2-201ENST00000365028 127 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 RNU6-946P-201ENST00000383878 107 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 RNU6-843P-201ENST00000384454 104 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 DYNLT3P2-201ENST00000442517 295 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 snoU13.27-201ENST00000459278 104 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AL163195.1-201ENST00000496941 348 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 SUMO2P5-201ENST00000506790 245 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AC079140.3-201ENST00000511111 550 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms