Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 RPS3AP52-201ENST00000435639 297 ntBASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 snoU109.2-201ENST00000459316 135 ntBASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 AC092436.3-201ENST00000511788 257 ntBASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 RNA5SP24-201ENST00000516478 95 ntBASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 Y_RNA.687-201ENST00000516558 91 ntBASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 AC006199.1-201ENST00000548728 219 ntBASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 AC010378.1-201ENST00000619270 362 ntBASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 AC064859.1-201ENST00000624741 174 ntBASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 CTSLP2-204ENST00000629029 392 ntBASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 RNU6-593P-201ENST00000364716 112 ntBASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 Y_RNA.509-201ENST00000384506 99 ntBASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 AC016831.2-201ENST00000417179 352 ntBASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 AC093151.1-201ENST00000427711 313 ntBASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 RPS15AP10-201ENST00000432472 382 ntBASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 AC236972.2-201ENST00000434979 310 ntBASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 UBE2V1P7-201ENST00000446395 340 ntBASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 AL513124.1-201ENST00000450410 614 ntBASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 AC008413.1-201ENST00000511864 177 ntBASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 ELOCP5-201ENST00000604924 333 ntBASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 RPL23AP88-201ENST00000605759 454 ntBASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 AC108206.1-201ENST00000570186 4159 ntBASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 FTX-214ENST00000638437 12267 ntTSL 5 BASIC4.16□□□□□ -1.74
CDK11AQ9UQ88 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.15□□□□□ -1.74
CDK11AQ9UQ88 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 SNORD73A-201ENST00000386062 65 ntBASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 FABP5P14-201ENST00000437273 393 ntBASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 AL031274.1-201ENST00000450334 232 ntBASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 RNU6-1037P-201ENST00000459571 107 ntBASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 RPL23AP45-201ENST00000476406 468 ntBASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 YWHAEP4-201ENST00000505390 198 ntBASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 RNU1-54P-201ENST00000517181 120 ntBASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 IMMP1LP2-201ENST00000552954 492 ntBASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 SNORD53-201ENST00000579969 78 ntBASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 MIR3605-201ENST00000583214 100 ntBASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 MIR3117-201ENST00000584034 78 ntBASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 POLR3GP2-201ENST00000588366 668 ntBASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 AL670379.10-201ENST00000604330 253 ntBASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 AL670379.9-201ENST00000605428 253 ntBASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 AL359757.2-201ENST00000624309 274 ntBASIC4.15□□□□□ -1.75
CDK11AQ9UQ88 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 RNU4-79P-201ENST00000362764 141 ntBASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 Y_RNA.482-201ENST00000384377 111 ntBASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 RNU6-95P-201ENST00000384697 107 ntBASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 MIR518D-201ENST00000385014 87 ntBASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 AL445687.1-201ENST00000439946 251 ntBASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 AL161651.1-201ENST00000440882 223 ntBASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 MTND4P17-201ENST00000470444 350 ntBASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 AIG1P1-201ENST00000503376 148 ntBASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 RNU6-377P-201ENST00000515965 102 ntBASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 AC104576.1-201ENST00000524225 88 ntBASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 AC093027.1-201ENST00000546698 429 ntBASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CDK11AQ9UQ88 CDC27P3-201ENST00000635418 1910 ntBASIC4.13□□□□□ -1.75
CDK11AQ9UQ88 SNORD62.1-201ENST00000362541 86 ntBASIC4.13□□□□□ -1.75
CDK11AQ9UQ88 Y_RNA.67-201ENST00000362870 100 ntBASIC4.13□□□□□ -1.75
CDK11AQ9UQ88 RNU6-1280P-201ENST00000365211 107 ntBASIC4.13□□□□□ -1.75
CDK11AQ9UQ88 RNU6-1297P-201ENST00000384415 104 ntBASIC4.13□□□□□ -1.75
CDK11AQ9UQ88 Y_RNA.535-201ENST00000384612 99 ntBASIC4.13□□□□□ -1.75
CDK11AQ9UQ88 RNA5SP344-201ENST00000411081 104 ntBASIC4.13□□□□□ -1.75
CDK11AQ9UQ88 AL590632.1-201ENST00000424289 371 ntBASIC4.13□□□□□ -1.75
CDK11AQ9UQ88 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.13□□□□□ -1.75
CDK11AQ9UQ88 AC092001.1-201ENST00000453012 261 ntBASIC4.13□□□□□ -1.75
CDK11AQ9UQ88 RNU6-559P-201ENST00000516151 98 ntBASIC4.13□□□□□ -1.75
CDK11AQ9UQ88 AC109329.2-201ENST00000519658 482 ntBASIC4.13□□□□□ -1.75
CDK11AQ9UQ88 AC010186.2-204ENST00000537668 439 ntBASIC4.13□□□□□ -1.75
CDK11AQ9UQ88 AL356280.1-201ENST00000603614 379 ntBASIC4.13□□□□□ -1.75
CDK11AQ9UQ88 AC016727.1-205ENST00000605437 569 ntBASIC4.13□□□□□ -1.75
CDK11AQ9UQ88 RNA5SP432-201ENST00000362480 116 ntBASIC4.12□□□□□ -1.75
CDK11AQ9UQ88 Y_RNA.431-201ENST00000384086 102 ntBASIC4.12□□□□□ -1.75
CDK11AQ9UQ88 Y_RNA.460-201ENST00000384255 102 ntBASIC4.12□□□□□ -1.75
CDK11AQ9UQ88 RPS20P15-201ENST00000412792 311 ntBASIC4.12□□□□□ -1.75
CDK11AQ9UQ88 AC009963.1-201ENST00000417265 157 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms