Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 RNU4-80P-201ENST00000363200 141 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 RNA5SP97-201ENST00000365006 84 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 RNU6-211P-201ENST00000384047 107 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 MIR544A-201ENST00000384855 91 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 MIR199A2-201ENST00000385289 110 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 SNORA26.3-201ENST00000391119 136 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 FTH1P15-201ENST00000406984 280 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 RN7SKP177-201ENST00000410567 355 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 RPS26P42-201ENST00000413485 326 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 AC024067.1-201ENST00000426199 223 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 AC004975.1-201ENST00000428733 208 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 AL500522.2-201ENST00000448562 343 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 SNRPGP7-201ENST00000469016 106 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 RNU6-191P-201ENST00000516295 94 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 SNORA31.23-201ENST00000517219 133 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 AL606490.9-201ENST00000603331 271 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 AC010999.1-201ENST00000611856 324 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 AC092628.2-201ENST00000622492 339 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 AC110491.1-201ENST00000562191 2010 ntBASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 AC022336.2-201ENST00000568966 2538 ntBASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 RNU4-56P-201ENST00000364700 142 ntBASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 RNU6-22P-201ENST00000384355 107 ntBASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 AC112220.1-201ENST00000434628 355 ntBASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 IFNA11P-201ENST00000446352 526 ntBASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 AC021231.3-201ENST00000558497 370 ntBASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 AC090877.1-201ENST00000561418 344 ntBASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 HSPE1P5-201ENST00000561489 272 ntBASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 AC007224.1-201ENST00000564410 144 ntBASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 AC084757.4-201ENST00000616350 526 ntBASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.01□□□□□ -1.77
AP4E1Q9UPM8 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
AP4E1Q9UPM8 AC092268.1-201ENST00000342691 405 ntBASIC4□□□□□ -1.77
AP4E1Q9UPM8 PPIAP31-201ENST00000405422 495 ntBASIC4□□□□□ -1.77
AP4E1Q9UPM8 Y_RNA.595-201ENST00000410403 105 ntBASIC4□□□□□ -1.77
AP4E1Q9UPM8 RNU6-628P-201ENST00000410675 107 ntBASIC4□□□□□ -1.77
AP4E1Q9UPM8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4□□□□□ -1.77
AP4E1Q9UPM8 AC125238.1-201ENST00000448842 249 ntBASIC4□□□□□ -1.77
AP4E1Q9UPM8 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4□□□□□ -1.77
AP4E1Q9UPM8 RNU6-479P-201ENST00000516348 105 ntBASIC4□□□□□ -1.77
AP4E1Q9UPM8 CKS1BP7-201ENST00000522230 235 ntBASIC4□□□□□ -1.77
AP4E1Q9UPM8 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4□□□□□ -1.77
AP4E1Q9UPM8 MIR3145-201ENST00000580727 82 ntBASIC4□□□□□ -1.77
AP4E1Q9UPM8 AL008718.3-201ENST00000610217 321 ntBASIC4□□□□□ -1.77
AP4E1Q9UPM8 MIR6875-201ENST00000617506 72 ntBASIC4□□□□□ -1.77
AP4E1Q9UPM8 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4□□□□□ -1.77
AP4E1Q9UPM8 snoU18.1-201ENST00000629629 71 ntBASIC4□□□□□ -1.77
AP4E1Q9UPM8 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4□□□□□ -1.77
AP4E1Q9UPM8 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4□□□□□ -1.77
AP4E1Q9UPM8 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4□□□□□ -1.77
AP4E1Q9UPM8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4□□□□□ -1.77
AP4E1Q9UPM8 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
AP4E1Q9UPM8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4□□□□□ -1.77
AP4E1Q9UPM8 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4□□□□□ -1.77
AP4E1Q9UPM8 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
AP4E1Q9UPM8 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
AP4E1Q9UPM8 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
AP4E1Q9UPM8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 Y_RNA.101-201ENST00000363154 102 ntBASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 RNU6-959P-201ENST00000384671 107 ntBASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 Y_RNA.571-201ENST00000384753 98 ntBASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 RNU6-131P-201ENST00000391144 107 ntBASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 MIR888-201ENST00000401186 77 ntBASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 AC078809.1-201ENST00000427601 140 ntBASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 AC091390.1-201ENST00000433904 331 ntBASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 AC140059.1-201ENST00000489238 361 ntBASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 RPS27AP10-201ENST00000496103 208 ntBASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 HMGB3P3-201ENST00000510526 400 ntBASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 AC023141.12-201ENST00000512399 199 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms