Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 SNORA31.6-201ENST00000516241 130 ntBASIC4.46□□□□□ -1.7
BRPF3Q9ULD4 DEFB108E-201ENST00000524692 240 ntBASIC4.46□□□□□ -1.7
BRPF3Q9ULD4 HSPE1P4-201ENST00000550617 308 ntBASIC4.46□□□□□ -1.7
BRPF3Q9ULD4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.46□□□□□ -1.7
BRPF3Q9ULD4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.46□□□□□ -1.7
BRPF3Q9ULD4 AC024220.1-201ENST00000603675 484 ntBASIC4.46□□□□□ -1.7
BRPF3Q9ULD4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.46□□□□□ -1.7
BRPF3Q9ULD4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.46□□□□□ -1.7
BRPF3Q9ULD4 AC110491.1-201ENST00000562191 2010 ntBASIC4.46□□□□□ -1.7
BRPF3Q9ULD4 MAPK10-322ENST00000641485 4530 ntBASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 MIR30E-201ENST00000362104 92 ntBASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 SNORD81.1-201ENST00000363064 77 ntBASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 SNORD27-201ENST00000363981 72 ntBASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 RNU6-879P-201ENST00000364328 108 ntBASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 RNU1-139P-201ENST00000391307 165 ntBASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 RNU2-64P-201ENST00000411315 191 ntBASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 RPS15AP7-201ENST00000439294 405 ntBASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 GPM6BP3-201ENST00000442797 145 ntBASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 AC010401.1-201ENST00000463867 348 ntBASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 RNU6-1114P-201ENST00000516022 107 ntBASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 AC087499.8-201ENST00000578406 226 ntBASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 AL137849.1-201ENST00000604767 169 ntBASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.45□□□□□ -1.7
BRPF3Q9ULD4 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 RNA5SP139-201ENST00000364340 117 ntBASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 RNU6-1141P-201ENST00000364520 107 ntBASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 RNU6-318P-201ENST00000384283 103 ntBASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 RNA5SP38-201ENST00000410750 119 ntBASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 AL139247.1-201ENST00000422768 325 ntBASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 AC005300.1-201ENST00000428401 373 ntBASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 AC012308.1-201ENST00000451232 178 ntBASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 RPS4XP22-201ENST00000480755 780 ntBASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 AC016632.1-201ENST00000503994 196 ntBASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 AC006199.1-201ENST00000548728 219 ntBASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 MIR5571-201ENST00000577998 113 ntBASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 MIR4286-201ENST00000580651 93 ntBASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 VN1R85P-201ENST00000601587 426 ntBASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 AC010900.2-201ENST00000604508 210 ntBASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 MIR3529-201ENST00000637713 78 ntBASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 AC091564.4-201ENST00000533934 2194 ntBASIC4.44□□□□□ -1.7
BRPF3Q9ULD4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.43□□□□□ -1.7
BRPF3Q9ULD4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BRPF3Q9ULD4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BRPF3Q9ULD4 RNU6-926P-201ENST00000384075 107 ntBASIC4.43□□□□□ -1.7
BRPF3Q9ULD4 RNU6-937P-201ENST00000384325 106 ntBASIC4.43□□□□□ -1.7
BRPF3Q9ULD4 RNU6-541P-201ENST00000384709 110 ntBASIC4.43□□□□□ -1.7
BRPF3Q9ULD4 RNA5SP213-201ENST00000391031 106 ntBASIC4.43□□□□□ -1.7
BRPF3Q9ULD4 MIR1193-201ENST00000408109 78 ntBASIC4.43□□□□□ -1.7
BRPF3Q9ULD4 SNORA3.3-201ENST00000408712 125 ntBASIC4.43□□□□□ -1.7
BRPF3Q9ULD4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.43□□□□□ -1.7
BRPF3Q9ULD4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.43□□□□□ -1.7
BRPF3Q9ULD4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.43□□□□□ -1.7
BRPF3Q9ULD4 RNU6-1338P-201ENST00000516328 91 ntBASIC4.43□□□□□ -1.7
BRPF3Q9ULD4 AC137590.2-201ENST00000619709 240 ntBASIC4.43□□□□□ -1.7
BRPF3Q9ULD4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.43□□□□□ -1.7
BRPF3Q9ULD4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
BRPF3Q9ULD4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
BRPF3Q9ULD4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 RNU6-799P-201ENST00000363567 107 ntBASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 U8.10-201ENST00000384260 133 ntBASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 Y_RNA.581-201ENST00000391017 97 ntBASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 Y_RNA.602-201ENST00000410535 92 ntBASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 RN7SKP61-201ENST00000410642 295 ntBASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 AL590135.1-201ENST00000422215 156 ntBASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 AP001025.1-201ENST00000486139 332 ntBASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 RPS23P5-201ENST00000495419 428 ntBASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 CEP170P1-201ENST00000502249 4587 ntBASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 CKS1BP7-201ENST00000522230 235 ntBASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 AC027288.2-201ENST00000553028 243 ntBASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 HMGN2P15-201ENST00000585707 270 ntBASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 AL133393.1-201ENST00000603277 287 ntBASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 RNU1-30P-201ENST00000606575 163 ntBASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 MIR3199-2-201ENST00000636243 86 ntBASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 AC007496.3-201ENST00000624987 3443 ntBASIC4.42□□□□□ -1.7
BRPF3Q9ULD4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.41□□□□□ -1.7
BRPF3Q9ULD4 Y_RNA.16-201ENST00000362421 102 ntBASIC4.41□□□□□ -1.7
BRPF3Q9ULD4 SNORD113-8-201ENST00000363497 74 ntBASIC4.41□□□□□ -1.7
BRPF3Q9ULD4 Y_RNA.319-201ENST00000365138 92 ntBASIC4.41□□□□□ -1.7
BRPF3Q9ULD4 Y_RNA.352-201ENST00000365439 102 ntBASIC4.41□□□□□ -1.7
BRPF3Q9ULD4 RNU6-338P-201ENST00000383888 105 ntBASIC4.41□□□□□ -1.7
BRPF3Q9ULD4 RNU6-1027P-201ENST00000383998 107 ntBASIC4.41□□□□□ -1.7
BRPF3Q9ULD4 Y_RNA.539-201ENST00000384635 107 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms