Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 KPNA2P1-201ENST00000458289 1591 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.69□□□□□ -1.98
SIX4Q9UIU6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SIX4Q9UIU6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SIX4Q9UIU6 MIR449A-201ENST00000362113 91 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 RNU6-428P-201ENST00000362942 107 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 RNU6-1059P-201ENST00000363752 98 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 RNU5E-7P-201ENST00000365290 117 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 XGY1-201ENST00000381172 446 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 MIR517A-201ENST00000385001 87 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 RPL21P75-201ENST00000396599 483 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 RPL21P28-201ENST00000401418 483 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 RNU6-325P-201ENST00000411132 105 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 AL030996.1-201ENST00000411430 235 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 MTCO2P27-201ENST00000420740 428 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 AL714022.1-201ENST00000439897 151 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.69□□□□□ -1.98
SIX4Q9UIU6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.69□□□□□ -1.98
SIX4Q9UIU6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SIX4Q9UIU6 RPL21P39-201ENST00000463605 483 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 AC087190.1-201ENST00000484462 480 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.69□□□□□ -1.98
SIX4Q9UIU6 AC093591.1-201ENST00000491435 481 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 RPL21P16-201ENST00000495531 483 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.69□□□□□ -1.98
SIX4Q9UIU6 RNU1-54P-201ENST00000517181 120 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.69□□□□□ -1.98
SIX4Q9UIU6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.69□□□□□ -1.98
SIX4Q9UIU6 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.69□□□□□ -1.98
SIX4Q9UIU6 AC009314.1-201ENST00000603871 304 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 AL353621.2-201ENST00000605340 133 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 AC124303.1-201ENST00000605703 360 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 AC098657.3-201ENST00000620434 263 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 AC244517.12-201ENST00000623581 663 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 SCARNA4-202ENST00000625402 129 ntBASIC2.69□□□□□ -1.98
SIX4Q9UIU6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SIX4Q9UIU6 AC110491.1-201ENST00000562191 2010 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 RNU6-942P-201ENST00000363002 107 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 SNORD56.5-201ENST00000364281 72 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 RNU6-593P-201ENST00000364716 112 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 Y_RNA.500-201ENST00000384466 111 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 MIR592-201ENST00000384959 97 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 Y_RNA.579-201ENST00000390939 94 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 Y_RNA.594-201ENST00000410373 140 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 AL354751.2-201ENST00000415471 210 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.68□□□□□ -1.98
SIX4Q9UIU6 USP9YP30-201ENST00000430729 455 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 HIGD1AP2-201ENST00000446367 280 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 HMGN2P10-201ENST00000448085 265 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 AC128713.1-201ENST00000471495 306 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 AC005741.1-201ENST00000511094 432 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.68□□□□□ -1.98
SIX4Q9UIU6 RNU6-581P-201ENST00000516214 105 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 Y_RNA.670-201ENST00000516255 105 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 AP004607.1-201ENST00000524456 203 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.68□□□□□ -1.98
SIX4Q9UIU6 MIR5092-201ENST00000583139 88 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.68□□□□□ -1.98
SIX4Q9UIU6 AP000787.2-201ENST00000604432 568 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 AC018462.2-201ENST00000605375 395 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 AP000654.2-201ENST00000605633 586 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 RPL23AP88-201ENST00000605759 454 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 AC009229.3-201ENST00000608056 282 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 U4.3-201ENST00000621047 82 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 AL669831.3-213ENST00000636676 183 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 AC099654.10-201ENST00000640395 161 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 CDC27P3-201ENST00000635418 1910 ntBASIC2.68□□□□□ -1.98
SIX4Q9UIU6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SIX4Q9UIU6 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 MTND4P23-201ENST00000447723 1363 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 Y_RNA.138-201ENST00000363462 102 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 RNA5SP456-201ENST00000364002 114 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 Y_RNA.431-201ENST00000384086 102 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 RNU6-43P-201ENST00000384302 107 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 SNORA75.4-201ENST00000391278 119 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 MTCYBP4-201ENST00000401524 249 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 Y_RNA.646-201ENST00000410980 101 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 RNU6-293P-201ENST00000411259 106 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 AC023141.4-201ENST00000412031 328 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.67□□□□□ -1.98
SIX4Q9UIU6 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.67□□□□□ -1.98
SIX4Q9UIU6 AC013470.1-201ENST00000453438 462 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 MTCO3P10-201ENST00000455912 772 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 RPL7P42-201ENST00000481005 679 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 AK3P2-201ENST00000507976 429 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 PTP4A1P4-201ENST00000512479 322 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 SNORA43.2-201ENST00000516652 128 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.67□□□□□ -1.98
SIX4Q9UIU6 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.67□□□□□ -1.98
SIX4Q9UIU6 ELOCP31-201ENST00000540463 467 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 AC021739.1-201ENST00000559631 174 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.67□□□□□ -1.98
SIX4Q9UIU6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SIX4Q9UIU6 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 U4.7-201ENST00000638126 106 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SIX4Q9UIU6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SIX4Q9UIU6 AC010680.1-201ENST00000590024 3590 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms