Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.22□□□□□ -2.44
SCN11AQ9UI33 DAP3P1-201ENST00000441522 278 ntBASIC-0.22□□□□□ -2.44
SCN11AQ9UI33 SNORA31.2-201ENST00000516019 134 ntBASIC-0.22□□□□□ -2.44
SCN11AQ9UI33 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.22□□□□□ -2.44
SCN11AQ9UI33 AC104417.1-201ENST00000523974 751 ntBASIC-0.22□□□□□ -2.44
SCN11AQ9UI33 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.22□□□□□ -2.44
SCN11AQ9UI33 AP000763.2-201ENST00000540641 163 ntBASIC-0.22□□□□□ -2.44
SCN11AQ9UI33 AC130324.3-201ENST00000614165 542 ntBASIC-0.22□□□□□ -2.44
SCN11AQ9UI33 RMST_4.1-201ENST00000616886 107 ntBASIC-0.22□□□□□ -2.44
SCN11AQ9UI33 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-0.22□□□□□ -2.44
SCN11AQ9UI33 AC068647.2-201ENST00000637380 353 ntBASIC-0.22□□□□□ -2.44
SCN11AQ9UI33 RNA5SP264-201ENST00000363115 107 ntBASIC-0.22□□□□□ -2.45
SCN11AQ9UI33 SNORD114-28-201ENST00000363610 72 ntBASIC-0.22□□□□□ -2.45
SCN11AQ9UI33 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.22□□□□□ -2.45
SCN11AQ9UI33 RNU4-9P-201ENST00000364951 139 ntBASIC-0.22□□□□□ -2.45
SCN11AQ9UI33 RNU6V-201ENST00000384105 107 ntBASIC-0.22□□□□□ -2.45
SCN11AQ9UI33 MIR520A-201ENST00000384862 85 ntBASIC-0.22□□□□□ -2.45
SCN11AQ9UI33 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.22□□□□□ -2.45
SCN11AQ9UI33 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC-0.22□□□□□ -2.45
SCN11AQ9UI33 AC005094.1-201ENST00000440420 368 ntBASIC-0.22□□□□□ -2.45
SCN11AQ9UI33 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.22□□□□□ -2.45
SCN11AQ9UI33 snoU13.11-201ENST00000459219 104 ntBASIC-0.22□□□□□ -2.45
SCN11AQ9UI33 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.23□□□□□ -2.45
SCN11AQ9UI33 RNU6-877P-201ENST00000383868 107 ntBASIC-0.23□□□□□ -2.45
SCN11AQ9UI33 MIR518A1-201ENST00000385068 85 ntBASIC-0.23□□□□□ -2.45
SCN11AQ9UI33 AL353621.1-201ENST00000418219 243 ntBASIC-0.23□□□□□ -2.45
SCN11AQ9UI33 AC244098.3-201ENST00000424803 96 ntBASIC-0.23□□□□□ -2.45
SCN11AQ9UI33 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.23□□□□□ -2.45
SCN11AQ9UI33 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-0.23□□□□□ -2.45
SCN11AQ9UI33 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-0.23□□□□□ -2.45
SCN11AQ9UI33 HMGB1P28-201ENST00000507778 552 ntBASIC-0.23□□□□□ -2.45
SCN11AQ9UI33 AC093259.1-201ENST00000509755 300 ntBASIC-0.23□□□□□ -2.45
SCN11AQ9UI33 AL353997.4-201ENST00000586196 166 ntBASIC-0.23□□□□□ -2.45
SCN11AQ9UI33 AC012065.4-201ENST00000602445 679 ntBASIC-0.23□□□□□ -2.45
SCN11AQ9UI33 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC-0.23□□□□□ -2.45
SCN11AQ9UI33 RNU6-302P-201ENST00000365249 107 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 RNU6-969P-201ENST00000383900 105 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 MTND2P4-201ENST00000445034 1004 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 RNU7-90P-201ENST00000459216 62 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 AC069113.3-201ENST00000521019 150 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 AC107304.1-201ENST00000604229 296 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 uc_338.6-201ENST00000613544 171 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 AC138627.2-201ENST00000624202 601 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 CASC19-280ENST00000642102 1351 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 RNU2-33P-201ENST00000410344 192 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 FAM204CP-201ENST00000424489 642 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 SKA2P1-201ENST00000425592 390 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 AC068135.1-201ENST00000446164 246 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 RPS3AP17-201ENST00000472594 777 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 SUMO1P1-201ENST00000497904 306 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 RNU6-863P-201ENST00000515989 104 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 RNA5SP481-201ENST00000516814 122 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 BNIP3P31-201ENST00000604515 566 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 AC013476.2-201ENST00000614456 459 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 AC073349.3-201ENST00000617616 186 ntBASIC-0.24□□□□□ -2.45
SCN11AQ9UI33 MTND5P16-201ENST00000460269 1703 ntBASIC-0.25□□□□□ -2.45
SCN11AQ9UI33 AL390237.1-201ENST00000404226 1415 ntBASIC-0.25□□□□□ -2.45
SCN11AQ9UI33 RNU6-654P-201ENST00000364373 107 ntBASIC-0.25□□□□□ -2.45
SCN11AQ9UI33 RNU6-898P-201ENST00000365627 104 ntBASIC-0.25□□□□□ -2.45
SCN11AQ9UI33 RNU6-921P-201ENST00000384361 107 ntBASIC-0.25□□□□□ -2.45
SCN11AQ9UI33 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.25□□□□□ -2.45
SCN11AQ9UI33 TAF13P2-201ENST00000416876 286 ntBASIC-0.25□□□□□ -2.45
SCN11AQ9UI33 VPS26BP1-201ENST00000417155 755 ntBASIC-0.25□□□□□ -2.45
SCN11AQ9UI33 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC-0.25□□□□□ -2.45
SCN11AQ9UI33 MTCO2P25-201ENST00000447065 681 ntBASIC-0.25□□□□□ -2.45
SCN11AQ9UI33 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.25□□□□□ -2.45
SCN11AQ9UI33 MTCO3P2-201ENST00000457365 171 ntBASIC-0.25□□□□□ -2.45
SCN11AQ9UI33 AC106038.2-201ENST00000520706 568 ntBASIC-0.25□□□□□ -2.45
SCN11AQ9UI33 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC-0.25□□□□□ -2.45
SCN11AQ9UI33 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
SCN11AQ9UI33 SNORD118-201ENST00000363593 134 ntBASIC-0.26□□□□□ -2.45
SCN11AQ9UI33 RNU6-1019P-201ENST00000364424 107 ntBASIC-0.26□□□□□ -2.45
SCN11AQ9UI33 SNORA32.3-201ENST00000384772 121 ntBASIC-0.26□□□□□ -2.45
SCN11AQ9UI33 MIR643-201ENST00000385267 97 ntBASIC-0.26□□□□□ -2.45
SCN11AQ9UI33 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.26□□□□□ -2.45
SCN11AQ9UI33 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC-0.26□□□□□ -2.45
SCN11AQ9UI33 AC002381.1-201ENST00000447049 280 ntBASIC-0.26□□□□□ -2.45
SCN11AQ9UI33 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC-0.26□□□□□ -2.45
SCN11AQ9UI33 RNU6-965P-201ENST00000516721 96 ntBASIC-0.26□□□□□ -2.45
SCN11AQ9UI33 RNU6-703P-201ENST00000516946 107 ntBASIC-0.26□□□□□ -2.45
SCN11AQ9UI33 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-0.26□□□□□ -2.45
SCN11AQ9UI33 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.26□□□□□ -2.45
SCN11AQ9UI33 AC090888.2-201ENST00000559765 1144 ntBASIC-0.26□□□□□ -2.45
SCN11AQ9UI33 MIR4431-201ENST00000579990 94 ntBASIC-0.26□□□□□ -2.45
SCN11AQ9UI33 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.26□□□□□ -2.45
SCN11AQ9UI33 RNU6-87P-201ENST00000607561 108 ntBASIC-0.26□□□□□ -2.45
SCN11AQ9UI33 RNU6-23P-201ENST00000363283 107 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 MIR1468-201ENST00000410600 86 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 AL035398.1-201ENST00000430869 322 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms