Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 MIR5004-201ENST00000579078 107 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 MIR3128-201ENST00000581957 66 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 AC073657.2-201ENST00000605661 303 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 U4.7-201ENST00000638126 106 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 AL359693.1-201ENST00000614959 2407 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 Y_RNA.60-201ENST00000362831 98 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 RNU6-770P-201ENST00000363929 105 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 SNORA69.1-201ENST00000390904 137 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 RPS29P13-201ENST00000402041 169 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 AC007098.1-201ENST00000420122 367 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 AC092047.1-201ENST00000424997 240 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 AC010099.1-201ENST00000455434 375 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 AL031183.1-201ENST00000457667 207 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 LINC01399-202ENST00000458450 244 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 U8.22-201ENST00000459141 133 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 AC098869.1-201ENST00000481627 292 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 AC010469.2-201ENST00000496412 480 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 AC010265.1-201ENST00000513509 211 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 RNU6-570P-201ENST00000517051 105 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 AC144568.1-201ENST00000520139 137 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 H3F3AP1-201ENST00000559984 334 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 AC099506.2-201ENST00000623074 221 ntBASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.21□□□□□ -1.9
LRIT1Q9P2V4 AL353743.1-202ENST00000431724 1695 ntBASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 FTLP6-201ENST00000355274 422 ntBASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 Y_RNA.14-201ENST00000362415 103 ntBASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 Y_RNA.123-201ENST00000363338 102 ntBASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 Y_RNA.350-201ENST00000365409 98 ntBASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 Y_RNA.471-201ENST00000384312 102 ntBASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 Y_RNA.477-201ENST00000384352 108 ntBASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 RNU6-1035P-201ENST00000384477 107 ntBASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 RNA5SP31-201ENST00000411144 127 ntBASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 AC126124.2-201ENST00000413542 321 ntBASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 RPL23AP82-202ENST00000427528 469 ntBASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 RPL30P10-201ENST00000488148 337 ntBASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 RNU6-703P-201ENST00000516946 107 ntBASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 AC034114.1-201ENST00000520293 285 ntBASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 AL109918.3-201ENST00000603072 338 ntBASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 AC073308.1-201ENST00000623696 305 ntBASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 MAPK10-322ENST00000641485 4530 ntBASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRIT1Q9P2V4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 RNU4-50P-201ENST00000364361 141 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 RNU5E-7P-201ENST00000365290 117 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 Y_RNA.489-201ENST00000384410 101 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 RNU6-140P-201ENST00000384566 108 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 Y_RNA.562-201ENST00000384695 113 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 MIR518D-201ENST00000385014 87 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 MIR34A-201ENST00000385130 110 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 RNU6-700P-201ENST00000391043 107 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 MIR1302-6-201ENST00000408466 90 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 Z82188.1-201ENST00000436709 154 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 RPL23AP22-201ENST00000437556 453 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 AC109925.1-201ENST00000478069 331 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 RNU6-377P-201ENST00000515965 102 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 RNU6-911P-201ENST00000516523 104 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 RNU6-928P-201ENST00000516876 104 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 AC109479.2-201ENST00000517842 174 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 AP003733.2-201ENST00000529409 171 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 AL590705.4-201ENST00000532209 134 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 MIR4325-201ENST00000583049 90 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 AL390123.1-201ENST00000603216 237 ntBASIC3.19□□□□□ -1.9
LRIT1Q9P2V4 AC096772.1-201ENST00000609146 564 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms