Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC015922.2-201ENST00000435593 184 ntBASIC0.92□□□□□ -2.26
CCDC88CQ9P219 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.92□□□□□ -2.26
CCDC88CQ9P219 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.92□□□□□ -2.26
CCDC88CQ9P219 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.92□□□□□ -2.26
CCDC88CQ9P219 RNU7-125P-201ENST00000458760 62 ntBASIC0.92□□□□□ -2.26
CCDC88CQ9P219 AL121594.1-201ENST00000475906 575 ntBASIC0.92□□□□□ -2.26
CCDC88CQ9P219 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.92□□□□□ -2.26
CCDC88CQ9P219 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.92□□□□□ -2.26
CCDC88CQ9P219 AC093788.1-201ENST00000609356 927 ntBASIC0.92□□□□□ -2.26
CCDC88CQ9P219 AL078595.3-201ENST00000623815 1166 ntBASIC0.92□□□□□ -2.26
CCDC88CQ9P219 AC103706.2-201ENST00000638080 240 ntBASIC0.92□□□□□ -2.26
CCDC88CQ9P219 MTND5P9-201ENST00000503854 1755 ntBASIC0.92□□□□□ -2.26
CCDC88CQ9P219 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 MIR301A-201ENST00000385261 86 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 RNU2-32P-201ENST00000411193 191 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 UBE2V1P10-201ENST00000414685 269 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 RPS15AP10-201ENST00000432472 382 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 RPL31P3-201ENST00000458430 332 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 RPL9P9-202ENST00000466501 579 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC098862.1-201ENST00000504991 413 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC079140.2-201ENST00000506193 142 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 RNU6-405P-201ENST00000516637 110 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AP003461.1-201ENST00000528866 78 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AP003122.4-201ENST00000530980 758 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC018630.3-201ENST00000542637 96 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 DPPA3P3-201ENST00000603842 430 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC083806.3-201ENST00000614016 455 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 Y_RNA.33-201ENST00000362591 102 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 Y_RNA.46-201ENST00000362695 102 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 RNU1-23P-201ENST00000363361 144 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 RNU6-414P-201ENST00000363705 104 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 RNU4-68P-201ENST00000364314 141 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 MIR1267-201ENST00000408723 78 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 RNU6-584P-201ENST00000410350 95 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 RNA5SP111-201ENST00000411386 101 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 MTCO2P8-201ENST00000412213 658 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC013410.2-201ENST00000422627 201 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 MTCYBP5-201ENST00000423752 1135 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AL356583.2-201ENST00000426536 280 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 USP9YP17-201ENST00000444617 696 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AL133217.1-201ENST00000450980 425 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 ATP5J2P3-201ENST00000451550 258 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 DEFB108E-201ENST00000524692 240 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC004908.3-201ENST00000610248 625 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 MIR6779-201ENST00000617283 64 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC022306.3-201ENST00000619930 550 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.91□□□□□ -2.26
CCDC88CQ9P219 AC008993.2-201ENST00000631744 806 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 LINC02555-201ENST00000563933 1951 ntBASIC0.91□□□□□ -2.26
CCDC88CQ9P219 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
CCDC88CQ9P219 RNU1-78P-201ENST00000391248 165 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 ELOCP4-201ENST00000420090 333 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 AC007283.2-201ENST00000424739 197 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 MTND1P20-201ENST00000430341 950 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 MTND1P18-201ENST00000448191 573 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 GAPDHP17-201ENST00000449858 1001 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.9□□□□□ -2.27
CCDC88CQ9P219 MTND1P12-201ENST00000455231 147 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 RNA5SP269-201ENST00000459032 137 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 RPL30P6-201ENST00000475925 342 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 AC010409.1-201ENST00000487382 476 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 AC009646.1-201ENST00000510455 318 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 RNA5SP384-201ENST00000516615 116 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CCDC88CQ9P219 MTATP6P15-201ENST00000527233 835 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 AP003181.2-201ENST00000528941 181 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.9□□□□□ -2.27
CCDC88CQ9P219 MTND1P8-201ENST00000571424 950 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 MIR4307-201ENST00000582802 84 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 AL078603.1-201ENST00000603824 313 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 AC011458.1-201ENST00000604034 617 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 AL132822.1-201ENST00000617063 513 ntBASIC0.9□□□□□ -2.27
CCDC88CQ9P219 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
CCDC88CQ9P219 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.9□□□□□ -2.27
CCDC88CQ9P219 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
CCDC88CQ9P219 RNU4-56P-201ENST00000364700 142 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 SNORD1A-201ENST00000364968 72 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms