Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RNU6-859P-201ENST00000362728 107 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 RNU6-301P-201ENST00000384277 107 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 SNORA51.11-201ENST00000384442 131 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 SNORD116-20-201ENST00000384529 92 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 RNA5SP354-201ENST00000391247 136 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 AL360182.1-201ENST00000397433 468 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 AL445529.1-201ENST00000398713 389 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
NDE1Q9NXR1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.28□□□□□ -2.04
NDE1Q9NXR1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.28□□□□□ -2.04
NDE1Q9NXR1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.28□□□□□ -2.04
NDE1Q9NXR1 MTND4LP16-201ENST00000440828 295 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 AC025750.2-201ENST00000442609 450 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 AL135938.1-201ENST00000443141 297 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.28□□□□□ -2.04
NDE1Q9NXR1 S100A11P2-201ENST00000467589 312 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.28□□□□□ -2.04
NDE1Q9NXR1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.28□□□□□ -2.04
NDE1Q9NXR1 MRPS36P2-201ENST00000512569 299 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 SNORA43.2-201ENST00000516652 128 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.28□□□□□ -2.04
NDE1Q9NXR1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.28□□□□□ -2.04
NDE1Q9NXR1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.28□□□□□ -2.04
NDE1Q9NXR1 AC005668.1-201ENST00000571142 476 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 AC091152.3-201ENST00000604227 325 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 AC093732.2-201ENST00000607950 274 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 AC245884.12-201ENST00000615364 59 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 HMGB1P24-202ENST00000615653 685 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 SCARNA4-202ENST00000625402 129 ntBASIC2.28□□□□□ -2.04
NDE1Q9NXR1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NDE1Q9NXR1 AC016717.2-201ENST00000609089 5141 ntBASIC2.28□□□□□ -2.05
NDE1Q9NXR1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
NDE1Q9NXR1 Y_RNA.142-201ENST00000363491 102 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 RNU6-1329P-201ENST00000365664 107 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
NDE1Q9NXR1 MIR524-201ENST00000385242 87 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 MIR548F5-201ENST00000408421 86 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 AL117339.3-201ENST00000418733 162 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.27□□□□□ -2.05
NDE1Q9NXR1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.27□□□□□ -2.05
NDE1Q9NXR1 SNRPEP8-201ENST00000442866 260 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 AMD1P1-201ENST00000457220 922 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 RPL31P41-201ENST00000477967 372 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 AC104435.1-201ENST00000483483 166 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 AC090255.1-201ENST00000495779 349 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 AC026801.1-201ENST00000497178 464 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.27□□□□□ -2.05
NDE1Q9NXR1 AC008526.1-201ENST00000509149 338 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 AC046134.1-201ENST00000514454 666 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 AP005639.2-201ENST00000527592 928 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NDE1Q9NXR1 AC026371.1-201ENST00000551867 419 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.27□□□□□ -2.05
NDE1Q9NXR1 MIR3117-201ENST00000584034 78 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 AC023043.2-201ENST00000589678 1026 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 RPS15AP11-201ENST00000594193 385 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 AC116312.1-201ENST00000606841 314 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 uc_338.15-201ENST00000615470 191 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 AC063943.3-201ENST00000615562 356 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 UCA1.1-201ENST00000620952 75 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 AL137790.1-201ENST00000634283 177 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 TPTEP1-208ENST00000636884 213 ntBASIC2.27□□□□□ -2.05
NDE1Q9NXR1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
NDE1Q9NXR1 RNU6-562P-201ENST00000362731 107 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 Y_RNA.135-201ENST00000363439 95 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 RNU1-105P-201ENST00000363470 161 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NDE1Q9NXR1 RNU6-214P-201ENST00000384130 107 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 RNU6-1013P-201ENST00000384180 107 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 RNU6-750P-201ENST00000390946 107 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 RNU6-1009P-201ENST00000390996 107 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 RN7SKP32-201ENST00000410167 303 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 RNU6-1140P-201ENST00000410517 106 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 AC022028.1-201ENST00000412054 408 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.26□□□□□ -2.05
NDE1Q9NXR1 AL365400.1-201ENST00000431854 640 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 HMGB1P18-201ENST00000438801 619 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.26□□□□□ -2.05
NDE1Q9NXR1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.26□□□□□ -2.05
NDE1Q9NXR1 RNU7-26P-201ENST00000458980 63 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 RNU7-187P-201ENST00000458985 68 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 RPL23AP49-201ENST00000492925 468 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 GZMAP1-201ENST00000503054 631 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.26□□□□□ -2.05
NDE1Q9NXR1 RN7SKP24-201ENST00000515888 284 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 RNU6-566P-201ENST00000516790 107 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 RNA5SP454-201ENST00000517231 127 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NDE1Q9NXR1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.26□□□□□ -2.05
NDE1Q9NXR1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.26□□□□□ -2.05
NDE1Q9NXR1 AC079600.2-201ENST00000550076 130 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 AC121758.2-201ENST00000553271 193 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.26□□□□□ -2.05
NDE1Q9NXR1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.26□□□□□ -2.05
NDE1Q9NXR1 MIR4790-201ENST00000577799 79 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.26□□□□□ -2.05
NDE1Q9NXR1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NDE1Q9NXR1 AC243960.4-201ENST00000600532 288 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms