Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC115990.1-201ENST00000526957 301 ntBASIC2.6□□□□□ -1.99
SLC6A13Q9NSD5 AL359198.2-201ENST00000611836 194 ntBASIC2.6□□□□□ -1.99
SLC6A13Q9NSD5 AL355073.2-201ENST00000612106 557 ntBASIC2.6□□□□□ -1.99
SLC6A13Q9NSD5 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.6□□□□□ -1.99
SLC6A13Q9NSD5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SLC6A13Q9NSD5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SLC6A13Q9NSD5 MIR26A1-201ENST00000362205 77 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 SNORD62.1-201ENST00000362541 86 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 RNU6-529P-201ENST00000363383 104 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 RNU6-1285P-201ENST00000363480 105 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 RNU6-220P-201ENST00000390919 107 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 AL138885.1-201ENST00000405921 675 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 AC008267.5-201ENST00000424928 265 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 AL139132.1-201ENST00000431587 344 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 AC112220.1-201ENST00000434628 355 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 AL445687.1-201ENST00000439946 251 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 AL031659.1-201ENST00000447075 539 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 RPS29P27-201ENST00000463711 170 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 RNU2-53P-201ENST00000516257 147 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 RPPH1-2P-201ENST00000516688 293 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 ELOCP31-201ENST00000540463 467 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 MTCO3P13-201ENST00000577757 781 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 UBE2V2P2-201ENST00000587677 504 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 AC006386.2-201ENST00000624491 75 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 AC012005.1-201ENST00000624575 75 ntBASIC2.59□□□□□ -1.99
SLC6A13Q9NSD5 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.59□□□□□ -2
SLC6A13Q9NSD5 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.59□□□□□ -2
SLC6A13Q9NSD5 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.58□□□□□ -2
SLC6A13Q9NSD5 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.58□□□□□ -2
SLC6A13Q9NSD5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SLC6A13Q9NSD5 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SLC6A13Q9NSD5 RNU6-655P-201ENST00000362858 107 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 RNU1-72P-201ENST00000362976 153 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 Y_RNA.151-201ENST00000363566 112 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 RNU6-1210P-201ENST00000363775 107 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 Y_RNA.184-201ENST00000363884 108 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 SNORD81.2-201ENST00000365153 76 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.58□□□□□ -2
SLC6A13Q9NSD5 RNU6-851P-201ENST00000384565 107 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 BTF3L4P2-201ENST00000392798 346 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 MIR548K-201ENST00000408406 116 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 RN7SKP61-201ENST00000410642 295 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.58□□□□□ -2
SLC6A13Q9NSD5 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.58□□□□□ -2
SLC6A13Q9NSD5 COTL1P1-201ENST00000422309 375 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 MTND3P9-201ENST00000429526 346 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.58□□□□□ -2
SLC6A13Q9NSD5 HMGB1P18-201ENST00000438801 619 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 DAP3P1-201ENST00000441522 278 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 EEF1B2P7-201ENST00000451177 676 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.58□□□□□ -2
SLC6A13Q9NSD5 PCMTD1P1-201ENST00000455560 355 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 AL121594.1-201ENST00000475906 575 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.58□□□□□ -2
SLC6A13Q9NSD5 AC083906.5-201ENST00000503722 328 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 MTND5P5-201ENST00000503764 376 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 AC103851.1-201ENST00000506833 274 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.58□□□□□ -2
SLC6A13Q9NSD5 PTP4A1P4-201ENST00000512479 322 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 EIF4BP1-201ENST00000554881 351 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.58□□□□□ -2
SLC6A13Q9NSD5 LARP7P3-201ENST00000579888 337 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.58□□□□□ -2
SLC6A13Q9NSD5 AL161423.1-201ENST00000613700 262 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.58□□□□□ -2
SLC6A13Q9NSD5 AC092794.2-201ENST00000620933 563 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.58□□□□□ -2
SLC6A13Q9NSD5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
SLC6A13Q9NSD5 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.58□□□□□ -2
SLC6A13Q9NSD5 AP000560.1-201ENST00000624150 1937 ntBASIC2.58□□□□□ -2
SLC6A13Q9NSD5 AC000403.1-201ENST00000613696 3585 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.57□□□□□ -2
SLC6A13Q9NSD5 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SLC6A13Q9NSD5 RNU6-790P-201ENST00000384479 105 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 MIR517A-201ENST00000385001 87 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 AL139095.1-201ENST00000404326 391 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 NCOR1P3-201ENST00000420479 303 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 AIMP1P2-201ENST00000425294 312 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 AC022018.1-201ENST00000430685 241 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 AL353572.1-201ENST00000442490 417 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 MTND4P18-201ENST00000447010 465 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 MTND5P20-201ENST00000448677 143 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 AC073901.1-201ENST00000462471 408 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 SNRPGP7-201ENST00000469016 106 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.57□□□□□ -2
SLC6A13Q9NSD5 Y_RNA.691-201ENST00000516611 103 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 AP002404.1-201ENST00000532005 451 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 AC022080.3-201ENST00000544433 482 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 AC078795.3-201ENST00000602913 472 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 AC018889.1-201ENST00000605372 397 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 AC124303.1-201ENST00000605703 360 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 MIR8076-201ENST00000611401 83 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 TPTEP1-208ENST00000636884 213 ntBASIC2.57□□□□□ -2
SLC6A13Q9NSD5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms