Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 MIR411-201ENST00000362239 96 ntBASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 Y_RNA.286-201ENST00000364813 102 ntBASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 MIR513A2-201ENST00000385249 127 ntBASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 HLFP1-201ENST00000402375 499 ntBASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 RNU4-30P-201ENST00000410245 143 ntBASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 AL392103.1-201ENST00000447000 198 ntBASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 HMGN2P10-201ENST00000448085 265 ntBASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 AC117440.1-201ENST00000474107 571 ntBASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 AC025445.1-201ENST00000502728 300 ntBASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 RNU6-581P-201ENST00000516214 105 ntBASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 RNU6-928P-201ENST00000516876 104 ntBASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 CBX3P4-201ENST00000538909 354 ntBASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 AC011602.1-201ENST00000546484 331 ntBASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 UBL5P4-201ENST00000562584 236 ntBASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 MIR4423-201ENST00000580922 80 ntBASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 MIR8057-201ENST00000620957 69 ntBASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 ADAM3A-203ENST00000461344 2157 ntBASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
ZFYVE28Q9HCC9 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 HAUS6P2-201ENST00000433254 2404 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 AC092268.1-201ENST00000342691 405 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 SNORD9-201ENST00000362566 104 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 Y_RNA.76-201ENST00000362931 109 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 SNORD74.4-201ENST00000364129 80 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 RNU6-1145P-201ENST00000384246 107 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 Y_RNA.464-201ENST00000384282 110 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 MIR329-1-201ENST00000385028 80 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 YPEL5P1-201ENST00000419731 367 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 AC005326.1-201ENST00000429197 123 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 FTH1P6-201ENST00000430768 320 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 AC008155.2-201ENST00000464337 397 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 RPL26P26-201ENST00000480251 434 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 RPS29P20-201ENST00000489592 171 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 RNU2-58P-201ENST00000516403 183 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 SNORA25.14-201ENST00000516481 132 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 CKS1BP7-201ENST00000522230 235 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 AC024405.2-202ENST00000532731 184 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 AP002392.1-201ENST00000537692 208 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 AC021231.3-201ENST00000558497 370 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 AL162424.1-201ENST00000602325 221 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 AC012603.1-201ENST00000606424 528 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 MIR7851-201ENST00000610611 160 ntBASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZFYVE28Q9HCC9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 RNU6-545P-201ENST00000362681 104 ntBASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 RNU1-35P-201ENST00000362782 153 ntBASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 SNORD115-8-201ENST00000363856 82 ntBASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 SNORD115-38-201ENST00000365037 82 ntBASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 RNU6-20P-201ENST00000384106 107 ntBASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 Y_RNA.500-201ENST00000384466 111 ntBASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 RNU6-1001P-201ENST00000411265 100 ntBASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 RNU7-120P-201ENST00000459334 63 ntBASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 COX6CP14-201ENST00000469580 174 ntBASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 AC006517.1-201ENST00000480485 328 ntBASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 AC021739.1-201ENST00000559631 174 ntBASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 SNORA62.6-201ENST00000606322 83 ntBASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 AL359198.2-201ENST00000611836 194 ntBASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 AL110115.1-201ENST00000614396 364 ntBASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 U2.22-201ENST00000636441 106 ntBASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
ZFYVE28Q9HCC9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 SNORA25.1-201ENST00000362326 128 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 Y_RNA.230-201ENST00000364348 109 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 RNU6-740P-201ENST00000364734 105 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 RNU6-746P-201ENST00000384112 109 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 RNU6-514P-201ENST00000384208 107 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 U3.19-201ENST00000390893 196 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms