Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RNU4-79P-201ENST00000362764 141 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 RNU6-942P-201ENST00000363002 107 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 SNORA5B-201ENST00000363786 132 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 RNU6-1317P-201ENST00000364582 104 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 RNU2-52P-201ENST00000410680 190 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 RNU6-370P-201ENST00000411008 104 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 RNU6-325P-201ENST00000411132 105 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AL030996.1-201ENST00000411430 235 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.66□□□□□ -1.98
PCDH9Q9HC56 RPS15AP10-201ENST00000432472 382 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AC012308.1-201ENST00000451232 178 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.66□□□□□ -1.98
PCDH9Q9HC56 PCMTD1P1-201ENST00000455560 355 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AC006026.2-201ENST00000457376 180 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 RNU6-1037P-201ENST00000459571 107 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AP001486.1-201ENST00000463339 476 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 RPL9P9-202ENST00000466501 579 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AC109479.2-201ENST00000517842 174 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.66□□□□□ -1.98
PCDH9Q9HC56 TRAV32-201ENST00000553993 340 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AL355877.2-201ENST00000603670 358 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AC009314.1-201ENST00000603871 304 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AP000787.2-201ENST00000604432 568 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PCDH9Q9HC56 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AC004944.1-201ENST00000517807 3059 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 AC006026.1-201ENST00000444025 1803 ntBASIC2.65□□□□□ -1.98
PCDH9Q9HC56 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.65□□□□□ -1.98
PCDH9Q9HC56 MIR6073-201ENST00000352083 89 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 SNORD56.1-201ENST00000362913 68 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 Y_RNA.419-201ENST00000384041 102 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 RNU6-933P-201ENST00000384424 107 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 MIR517A-201ENST00000385001 87 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 MIR767-201ENST00000390228 109 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 RNA5SP354-201ENST00000391247 136 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 RNU6-293P-201ENST00000411259 106 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 AL117339.3-201ENST00000418733 162 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 AC063976.3-201ENST00000426849 329 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 AC092427.1-202ENST00000430569 476 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 ARL5AP4-201ENST00000430731 512 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.65□□□□□ -1.99
PCDH9Q9HC56 AL591043.1-201ENST00000432461 424 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 AL645568.3-201ENST00000433683 316 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.65□□□□□ -1.99
PCDH9Q9HC56 RPS12P2-201ENST00000439728 269 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.65□□□□□ -1.99
PCDH9Q9HC56 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 AC096725.1-201ENST00000514266 313 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 ACA59.2-201ENST00000517061 156 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 AC022634.1-201ENST00000520765 532 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.65□□□□□ -1.99
PCDH9Q9HC56 AC010186.2-204ENST00000537668 439 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.65□□□□□ -1.99
PCDH9Q9HC56 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.65□□□□□ -1.99
PCDH9Q9HC56 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.65□□□□□ -1.99
PCDH9Q9HC56 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.65□□□□□ -1.99
PCDH9Q9HC56 MIR4319-201ENST00000577285 85 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 AC103810.1-201ENST00000579873 453 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 AL161423.1-201ENST00000613700 262 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 AC084781.2-201ENST00000615568 161 ntBASIC2.65□□□□□ -1.99
PCDH9Q9HC56 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.65□□□□□ -1.99
PCDH9Q9HC56 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PCDH9Q9HC56 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
PCDH9Q9HC56 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.65□□□□□ -1.99
PCDH9Q9HC56 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PCDH9Q9HC56 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PCDH9Q9HC56 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.64□□□□□ -1.99
PCDH9Q9HC56 AC062016.1-201ENST00000355719 319 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 RNU6-694P-201ENST00000364071 147 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 Y_RNA.259-201ENST00000364619 101 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 RNU6-336P-201ENST00000364891 107 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 RNU6-1297P-201ENST00000384415 104 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 Y_RNA.535-201ENST00000384612 99 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 RNU6-19P-201ENST00000384718 107 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 AL133475.1-201ENST00000404414 305 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 RNA5SP184-201ENST00000411071 108 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 AL365496.1-201ENST00000426885 215 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.64□□□□□ -1.99
PCDH9Q9HC56 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.64□□□□□ -1.99
PCDH9Q9HC56 AC133134.1-201ENST00000466800 359 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 AL049873.1-201ENST00000480540 376 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 RPL23AP70-201ENST00000483361 460 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 MTCYBP40-201ENST00000509390 1135 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 AC116337.1-201ENST00000509680 687 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 RNU6-1213P-201ENST00000517075 94 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 GLYCAM1-201ENST00000546596 285 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.64□□□□□ -1.99
PCDH9Q9HC56 AC025281.1-201ENST00000567026 265 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 MIR3976-201ENST00000606807 139 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms