Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 HMGN2P30-201ENST00000423237 256 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 SETP5-201ENST00000437270 562 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 GPM6BP3-201ENST00000442797 145 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 MRPS10P1-201ENST00000448483 130 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 MTATP6P7-201ENST00000453315 681 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 snoU13.6-201ENST00000458785 104 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 RNU7-170P-201ENST00000459303 61 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 AP000873.1-201ENST00000463987 400 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 S100A11P1-201ENST00000477525 312 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 AP001025.1-201ENST00000486139 332 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 AC091959.1-201ENST00000495857 238 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-346P-201ENST00000516288 111 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 RNY3P16-201ENST00000516338 101 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 RN7SKP49-201ENST00000516675 260 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 RN7SKP209-201ENST00000516888 304 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 CYCSP30-201ENST00000546447 172 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 AC112200.1-201ENST00000625015 234 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 AC118273.1-201ENST00000525324 3006 ntBASIC3.34□□□□□ -1.88
SEC61A2Q9H9S3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.34□□□□□ -1.88
SEC61A2Q9H9S3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.34□□□□□ -1.88
SEC61A2Q9H9S3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 CEP170P1-201ENST00000502249 4587 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 Y_RNA.8-201ENST00000362353 102 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 RNU5B-2P-201ENST00000363036 113 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 Y_RNA.170-201ENST00000363746 110 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 Y_RNA.275-201ENST00000364726 110 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 RNU6-1175P-201ENST00000365200 107 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 RNU1-100P-201ENST00000365255 165 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 Y_RNA.446-201ENST00000384178 104 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 U8.11-201ENST00000384699 133 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 U8.12-201ENST00000384701 133 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 MIR329-1-201ENST00000385028 80 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 FTH1P15-201ENST00000406984 280 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 RN7SKP156-201ENST00000410308 342 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 AC074117.2-201ENST00000417130 397 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 AL139247.1-201ENST00000422768 325 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 AC125238.1-201ENST00000448842 249 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 U8.18-201ENST00000459285 133 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 AC117440.1-201ENST00000474107 571 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 RN7SKP83-201ENST00000516512 178 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 RNU6-58P-201ENST00000517143 103 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 AK6P2-201ENST00000549020 471 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 AL391261.3-201ENST00000557194 520 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 MIR4423-201ENST00000580922 80 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 KLKP1-201ENST00000595979 403 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 AC019159.1-201ENST00000605094 187 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 AC011921.3-201ENST00000605540 361 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 RNVU1-4-201ENST00000612985 164 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 AL021368.2-201ENST00000606125 5352 ntBASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SEC61A2Q9H9S3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 RNA5SP240-201ENST00000365355 128 ntBASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 RNU6-1289P-201ENST00000384431 106 ntBASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 Y_RNA.570-201ENST00000384750 101 ntBASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 RNA5SP424-201ENST00000390988 115 ntBASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 RNU6-159P-201ENST00000391080 106 ntBASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 MIR548I2-201ENST00000408348 149 ntBASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 RNA5SP239-201ENST00000410218 129 ntBASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 RN7SKP202-201ENST00000410439 330 ntBASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 AC138623.1-201ENST00000418060 216 ntBASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 AC009237.7-201ENST00000447357 229 ntBASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 RPL37P4-201ENST00000448908 268 ntBASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 AL645939.1-201ENST00000453429 797 ntBASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 RPS4XP22-201ENST00000480755 780 ntBASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 MRPL42P6-201ENST00000486397 371 ntBASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 RPS29P20-201ENST00000489592 171 ntBASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 RPL30P5-201ENST00000494923 336 ntBASIC3.32□□□□□ -1.88
SEC61A2Q9H9S3 Y_RNA.662-201ENST00000516028 97 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms