Protein–RNA interactions for Protein: Q9H9J4

USP42, Ubiquitin carboxyl-terminal hydrolase 42, humanhuman

Known RBP Predictions only

Length 1,324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP42Q9H9J4 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.25□□□□□ -2.21
USP42Q9H9J4 AC008269.2-201ENST00000561915 1105 ntBASIC1.25□□□□□ -2.21
USP42Q9H9J4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.25□□□□□ -2.21
USP42Q9H9J4 AC005730.3-201ENST00000583067 366 ntBASIC1.25□□□□□ -2.21
USP42Q9H9J4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.25□□□□□ -2.21
USP42Q9H9J4 AC013244.3-201ENST00000605614 388 ntBASIC1.25□□□□□ -2.21
USP42Q9H9J4 AL157392.4-201ENST00000609756 345 ntBASIC1.25□□□□□ -2.21
USP42Q9H9J4 AL590240.4-201ENST00000616908 390 ntBASIC1.25□□□□□ -2.21
USP42Q9H9J4 AP000484.1-201ENST00000620067 1252 ntBASIC1.25□□□□□ -2.21
USP42Q9H9J4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.25□□□□□ -2.21
USP42Q9H9J4 Y_RNA.46-201ENST00000362695 102 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 RNU6-414P-201ENST00000363705 104 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 RNU6-1105P-201ENST00000384774 107 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 RNA5SP390-201ENST00000410191 113 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 AC006366.1-201ENST00000422002 759 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.24□□□□□ -2.21
USP42Q9H9J4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.24□□□□□ -2.21
USP42Q9H9J4 AL135790.2-201ENST00000437701 267 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.24□□□□□ -2.21
USP42Q9H9J4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.24□□□□□ -2.21
USP42Q9H9J4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
USP42Q9H9J4 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 AC010409.1-201ENST00000487382 476 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 HMGN1P13-201ENST00000505795 138 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 AC025465.3-201ENST00000510570 311 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 MIR449C-201ENST00000516047 92 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 RNU2-10P-201ENST00000516375 211 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 RNA5SP384-201ENST00000516615 116 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.24□□□□□ -2.21
USP42Q9H9J4 DEFB131E-202ENST00000602581 683 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 AC174048.1-201ENST00000603389 144 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 RNU4-5P-201ENST00000607255 135 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 MIR6857-201ENST00000613267 93 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 AL139418.1-201ENST00000613613 177 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 MIR8063-201ENST00000621930 81 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 AC120349.3-201ENST00000624377 529 ntBASIC1.24□□□□□ -2.21
USP42Q9H9J4 RNU6-511P-201ENST00000363496 107 ntBASIC1.23□□□□□ -2.21
USP42Q9H9J4 RNU6-271P-201ENST00000363858 105 ntBASIC1.23□□□□□ -2.21
USP42Q9H9J4 RNU6-1176P-201ENST00000390955 107 ntBASIC1.23□□□□□ -2.21
USP42Q9H9J4 RNU1-78P-201ENST00000391248 165 ntBASIC1.23□□□□□ -2.21
USP42Q9H9J4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.23□□□□□ -2.21
USP42Q9H9J4 AL445305.1-201ENST00000432577 575 ntBASIC1.23□□□□□ -2.21
USP42Q9H9J4 Y_RNA.687-201ENST00000516558 91 ntBASIC1.23□□□□□ -2.21
USP42Q9H9J4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.23□□□□□ -2.21
USP42Q9H9J4 AC123904.2-201ENST00000548059 300 ntBASIC1.23□□□□□ -2.21
USP42Q9H9J4 AL391001.1-201ENST00000602747 715 ntBASIC1.23□□□□□ -2.21
USP42Q9H9J4 AL158050.2-201ENST00000605336 568 ntBASIC1.23□□□□□ -2.21
USP42Q9H9J4 MTND4P16-201ENST00000466108 1367 ntBASIC1.23□□□□□ -2.21
USP42Q9H9J4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.23□□□□□ -2.21
USP42Q9H9J4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
USP42Q9H9J4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
USP42Q9H9J4 RNY4P16-201ENST00000364768 94 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 RNU6-1179P-201ENST00000384667 107 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 MIR1267-201ENST00000408723 78 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.22□□□□□ -2.21
USP42Q9H9J4 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.22□□□□□ -2.21
USP42Q9H9J4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.22□□□□□ -2.21
USP42Q9H9J4 RPS15AP10-201ENST00000432472 382 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.22□□□□□ -2.21
USP42Q9H9J4 AL031313.1-201ENST00000448435 256 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.22□□□□□ -2.21
USP42Q9H9J4 AC006026.2-201ENST00000457376 180 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 RNU6-1132P-201ENST00000459214 107 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 snoU109.3-201ENST00000459477 145 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 MTND2P33-201ENST00000506452 1031 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 AC009646.1-201ENST00000510455 318 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 AC112206.3-201ENST00000514578 389 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 AC112206.4-201ENST00000515142 405 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 COPS8P3-201ENST00000526024 482 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 AC018630.3-201ENST00000542637 96 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 MIR4307-201ENST00000582802 84 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 RN7SL793P-201ENST00000583259 296 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 AC103810.9-201ENST00000606688 112 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 MIR98-201ENST00000606724 119 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
USP42Q9H9J4 RMST_4.1-201ENST00000616886 107 ntBASIC1.22□□□□□ -2.21
USP42Q9H9J4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
USP42Q9H9J4 OR4G2P-201ENST00000328113 903 ntBASIC1.21□□□□□ -2.22
USP42Q9H9J4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.21□□□□□ -2.22
USP42Q9H9J4 MTCYBP5-201ENST00000423752 1135 ntBASIC1.21□□□□□ -2.22
USP42Q9H9J4 AC092648.1-201ENST00000425870 423 ntBASIC1.21□□□□□ -2.22
USP42Q9H9J4 CBX3P6-201ENST00000430257 527 ntBASIC1.21□□□□□ -2.22
USP42Q9H9J4 AL008629.1-201ENST00000438615 184 ntBASIC1.21□□□□□ -2.22
USP42Q9H9J4 RNU6-405P-201ENST00000516637 110 ntBASIC1.21□□□□□ -2.22
USP42Q9H9J4 BNIP3P6-201ENST00000549284 499 ntBASIC1.21□□□□□ -2.22
USP42Q9H9J4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.21□□□□□ -2.22
USP42Q9H9J4 SUB1P4-201ENST00000566062 339 ntBASIC1.21□□□□□ -2.22
USP42Q9H9J4 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.21□□□□□ -2.22
USP42Q9H9J4 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.21□□□□□ -2.22
USP42Q9H9J4 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.21□□□□□ -2.22
USP42Q9H9J4 AP000654.2-201ENST00000605633 586 ntBASIC1.21□□□□□ -2.22
USP42Q9H9J4 AP002371.2-201ENST00000624450 503 ntBASIC1.21□□□□□ -2.22
USP42Q9H9J4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
USP42Q9H9J4 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.21□□□□□ -2.22
USP42Q9H9J4 RNU6-960P-201ENST00000364056 120 ntBASIC1.2□□□□□ -2.22
USP42Q9H9J4 SNORD114-6-201ENST00000364393 72 ntBASIC1.2□□□□□ -2.22
USP42Q9H9J4 RNU6-157P-201ENST00000383957 107 ntBASIC1.2□□□□□ -2.22
USP42Q9H9J4 RPS20P2-201ENST00000402520 389 ntBASIC1.2□□□□□ -2.22
USP42Q9H9J4 RPL21P111-201ENST00000418453 477 ntBASIC1.2□□□□□ -2.22
USP42Q9H9J4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms