Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 MIR449A-201ENST00000362113 91 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 Y_RNA.39-201ENST00000362620 98 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 RNU6-806P-201ENST00000365147 105 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 RNU6-174P-201ENST00000410406 106 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 CYCSP33-201ENST00000414485 327 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.04□□□□□ -1.92
EBF3Q9H4W6 AL133396.1-201ENST00000432048 687 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 AL353997.1-201ENST00000432936 108 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.04□□□□□ -1.92
EBF3Q9H4W6 RPS12P18-201ENST00000442381 270 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 RNU7-138P-201ENST00000459479 64 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 AC091179.1-201ENST00000461606 579 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 RPS23P3-201ENST00000470993 430 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 KC877373.1-201ENST00000479066 408 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 RPS15AP34-201ENST00000487776 387 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.04□□□□□ -1.92
EBF3Q9H4W6 RNY3P15-201ENST00000516297 97 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 Y_RNA.715-201ENST00000517082 110 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.04□□□□□ -1.92
EBF3Q9H4W6 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
EBF3Q9H4W6 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 HSBP1P1-201ENST00000555205 166 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 MIR4319-201ENST00000577285 85 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 MIR5692A1-201ENST00000580523 69 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 MIR5188-201ENST00000583467 113 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 AC125232.2-201ENST00000592457 143 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.04□□□□□ -1.92
EBF3Q9H4W6 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
EBF3Q9H4W6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
EBF3Q9H4W6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
EBF3Q9H4W6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.03□□□□□ -1.92
EBF3Q9H4W6 Y_RNA.214-201ENST00000364201 112 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 RNU4-42P-201ENST00000364738 142 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 Y_RNA.380-201ENST00000365663 111 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.03□□□□□ -1.92
EBF3Q9H4W6 Y_RNA.480-201ENST00000384364 102 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 Y_RNA.483-201ENST00000384380 101 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 MIR301A-201ENST00000385261 86 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 ELOCP20-201ENST00000422460 345 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.03□□□□□ -1.92
EBF3Q9H4W6 UBE2V1P4-201ENST00000425374 344 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.03□□□□□ -1.92
EBF3Q9H4W6 AL592045.1-201ENST00000429867 352 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 AC099799.1-201ENST00000439809 192 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 OSTCP8-201ENST00000445117 448 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.03□□□□□ -1.92
EBF3Q9H4W6 AL160314.1-201ENST00000490836 438 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 SUMO2P6-201ENST00000505273 288 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 RNU1-61P-201ENST00000516107 151 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 RNU6-1256P-201ENST00000516539 103 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 RNU6-143P-201ENST00000516942 93 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 AC007536.1-201ENST00000533382 349 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.03□□□□□ -1.92
EBF3Q9H4W6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
EBF3Q9H4W6 AC005899.2-201ENST00000584353 90 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 MIR548AC-201ENST00000585049 88 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.03□□□□□ -1.92
EBF3Q9H4W6 AC078899.3-201ENST00000599065 212 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 Z98751.3-201ENST00000604447 521 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 RNU6-85P-201ENST00000605989 107 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.03□□□□□ -1.92
EBF3Q9H4W6 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
EBF3Q9H4W6 AC008568.2-201ENST00000623862 2313 ntBASIC3.03□□□□□ -1.92
EBF3Q9H4W6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.03□□□□□ -1.92
EBF3Q9H4W6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
EBF3Q9H4W6 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
EBF3Q9H4W6 AC008669.1-201ENST00000565823 2178 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 RNU6-512P-201ENST00000364438 103 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 Y_RNA.314-201ENST00000365114 102 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 RNU6-741P-201ENST00000383889 107 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 Y_RNA.424-201ENST00000384063 103 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 Y_RNA.489-201ENST00000384410 101 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 RNU6-851P-201ENST00000384565 107 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 RNU2-33P-201ENST00000410344 192 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 RNU2-64P-201ENST00000411315 191 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.02□□□□□ -1.93
EBF3Q9H4W6 RPL21P40-201ENST00000428586 483 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 AL590383.1-201ENST00000428602 75 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 AL031274.1-201ENST00000450334 232 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 SSXP4-201ENST00000451349 245 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 FABP5P15-201ENST00000453566 214 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.02□□□□□ -1.93
EBF3Q9H4W6 SNORD127-201ENST00000458892 86 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.02□□□□□ -1.93
EBF3Q9H4W6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.02□□□□□ -1.93
EBF3Q9H4W6 RNU2-53P-201ENST00000516257 147 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 RNU6-1315P-201ENST00000517187 99 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.02□□□□□ -1.93
EBF3Q9H4W6 CBX3P8-201ENST00000532412 525 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.02□□□□□ -1.93
EBF3Q9H4W6 MIR1273C-201ENST00000578669 77 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 MIR3162-201ENST00000581818 82 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 AL031601.2-202ENST00000622650 282 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 Z99571.1-201ENST00000636677 394 ntBASIC3.02□□□□□ -1.93
EBF3Q9H4W6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.02□□□□□ -1.93
EBF3Q9H4W6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
EBF3Q9H4W6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.01□□□□□ -1.93
EBF3Q9H4W6 Y_RNA.64-201ENST00000362845 102 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 SNORD14.1-201ENST00000365609 90 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms