Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CDT1Q9H211 AC110491.1-201ENST00000562191 2010 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.91□□□□□ -1.94
CDT1Q9H211 Y_RNA.151-201ENST00000363566 112 ntBASIC2.91□□□□□ -1.94
CDT1Q9H211 RNU6-1160P-201ENST00000384546 104 ntBASIC2.91□□□□□ -1.94
CDT1Q9H211 Y_RNA.594-201ENST00000410373 140 ntBASIC2.91□□□□□ -1.94
CDT1Q9H211 RNU6-1050P-201ENST00000410388 107 ntBASIC2.91□□□□□ -1.94
CDT1Q9H211 AC023141.4-201ENST00000412031 328 ntBASIC2.91□□□□□ -1.94
CDT1Q9H211 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.91□□□□□ -1.94
CDT1Q9H211 AL139396.1-201ENST00000421137 167 ntBASIC2.91□□□□□ -1.94
CDT1Q9H211 TOMM20P4-201ENST00000427861 435 ntBASIC2.91□□□□□ -1.94
CDT1Q9H211 AC244505.4-201ENST00000434905 287 ntBASIC2.91□□□□□ -1.94
CDT1Q9H211 SSXP5-201ENST00000443473 287 ntBASIC2.91□□□□□ -1.94
CDT1Q9H211 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.91□□□□□ -1.94
CDT1Q9H211 AC128713.1-201ENST00000471495 306 ntBASIC2.91□□□□□ -1.94
CDT1Q9H211 RNA5SP384-201ENST00000516615 116 ntBASIC2.91□□□□□ -1.94
CDT1Q9H211 AC104576.1-201ENST00000524225 88 ntBASIC2.91□□□□□ -1.94
CDT1Q9H211 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.91□□□□□ -1.94
CDT1Q9H211 AC026371.1-201ENST00000551867 419 ntBASIC2.91□□□□□ -1.94
CDT1Q9H211 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.91□□□□□ -1.94
CDT1Q9H211 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.91□□□□□ -1.94
CDT1Q9H211 RPL23AP78-201ENST00000599928 470 ntBASIC2.91□□□□□ -1.94
CDT1Q9H211 AC016925.2-201ENST00000605108 242 ntBASIC2.91□□□□□ -1.94
CDT1Q9H211 Z69720.2-201ENST00000624755 279 ntBASIC2.91□□□□□ -1.94
CDT1Q9H211 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDT1Q9H211 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDT1Q9H211 AC099654.7-201ENST00000635788 2127 ntBASIC2.9□□□□□ -1.94
CDT1Q9H211 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CDT1Q9H211 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
CDT1Q9H211 Y_RNA.202-201ENST00000364083 110 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 RNU6-890P-201ENST00000384121 107 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 RNU6-842P-201ENST00000384269 107 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 RNU6-72P-201ENST00000384285 79 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 AL512633.1-201ENST00000399931 655 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 AC093151.1-201ENST00000427711 313 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.9□□□□□ -1.95
CDT1Q9H211 AL359672.1-201ENST00000442302 409 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 HMGN2P10-201ENST00000448085 265 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.9□□□□□ -1.95
CDT1Q9H211 BTF3P15-201ENST00000455606 336 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.9□□□□□ -1.95
CDT1Q9H211 RNU7-23P-201ENST00000459465 62 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 AC097473.1-201ENST00000508142 408 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 AC116337.1-201ENST00000509680 687 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 SMURF2P1-201ENST00000514992 481 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.9□□□□□ -1.95
CDT1Q9H211 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.9□□□□□ -1.95
CDT1Q9H211 SNRPGP18-201ENST00000553000 214 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 AC021739.1-201ENST00000559631 174 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.9□□□□□ -1.95
CDT1Q9H211 AC018462.2-201ENST00000605375 395 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.9□□□□□ -1.95
CDT1Q9H211 MIR6134-201ENST00000617606 109 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 AC010378.1-201ENST00000619270 362 ntBASIC2.9□□□□□ -1.95
CDT1Q9H211 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
CDT1Q9H211 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CDT1Q9H211 AC008264.2-201ENST00000610193 3731 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 Y_RNA.28-201ENST00000362554 111 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 Y_RNA.148-201ENST00000363557 117 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDT1Q9H211 Y_RNA.496-201ENST00000384444 101 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.89□□□□□ -1.95
CDT1Q9H211 U3.37-201ENST00000408528 213 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 SNORD56-201ENST00000413522 71 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 AL096701.2-201ENST00000416920 238 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 AC104332.2-201ENST00000429959 156 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 SNAP23P1-201ENST00000433229 246 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 RPL23AP45-201ENST00000476406 468 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 RAC1P5-201ENST00000512182 576 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 PTP4A1P4-201ENST00000512479 322 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 RNU6-581P-201ENST00000516214 105 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 RNU6-1016P-201ENST00000516689 94 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CDT1Q9H211 AC022634.1-201ENST00000520765 532 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 MIR4635-201ENST00000583759 79 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 AC020895.1-201ENST00000595362 272 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 AC008737.2-201ENST00000599446 118 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 AC008121.1-201ENST00000603244 268 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CDT1Q9H211 AL355802.3-201ENST00000607571 545 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 AC011890.2-201ENST00000613393 294 ntBASIC2.89□□□□□ -1.95
CDT1Q9H211 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CDT1Q9H211 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDT1Q9H211 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDT1Q9H211 ADAM3A-203ENST00000461344 2157 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CDT1Q9H211 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDT1Q9H211 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.88□□□□□ -1.95
CDT1Q9H211 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.88□□□□□ -1.95
CDT1Q9H211 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CDT1Q9H211 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.88□□□□□ -1.95
CDT1Q9H211 AL136360.1-201ENST00000503377 1900 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 RNU6-1115P-201ENST00000362490 106 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 Y_RNA.112-201ENST00000363250 102 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 RNU6-1329P-201ENST00000365664 107 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 RNU6-128P-201ENST00000383976 107 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 Y_RNA.463-201ENST00000384271 102 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 MIR196B-201ENST00000384852 84 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms