Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 DPH3P2-201ENST00000422618 250 ntBASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 AC023790.1-201ENST00000482174 347 ntBASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 RPL38P4-201ENST00000502376 214 ntBASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 MTCO3P7-201ENST00000510008 774 ntBASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 AC008834.1-201ENST00000511612 175 ntBASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 AC110588.1-201ENST00000559699 137 ntBASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 AC109446.2-201ENST00000567872 497 ntBASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 MIR3169-201ENST00000578032 83 ntBASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 MIR4760-201ENST00000585040 80 ntBASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 VN1R107P-201ENST00000601784 209 ntBASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 AC022418.1-201ENST00000624118 445 ntBASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 SNORD98-201ENST00000636377 67 ntBASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.35□□□□□ -2.19
SLIRPQ9GZT3 AP000648.3-201ENST00000623539 4507 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 RNU6-23P-201ENST00000363283 107 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 U3.4-201ENST00000363352 213 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 RNU6-336P-201ENST00000364891 107 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 Y_RNA.332-201ENST00000365271 113 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 RNU6-43P-201ENST00000384302 107 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 Y_RNA.480-201ENST00000384364 102 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 RNU6-393P-201ENST00000384475 107 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 RNU6-692P-201ENST00000384496 107 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 MT-TH-201ENST00000387441 69 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 RPS29P13-201ENST00000402041 169 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 AC007098.1-201ENST00000420122 367 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 MTND1P18-201ENST00000448191 573 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 HSPE1P24-201ENST00000450782 238 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 RPS29P15-201ENST00000458329 171 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 RPS29P23-201ENST00000458635 123 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 RNA5SP269-201ENST00000459032 137 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 GMFBP1-201ENST00000467831 427 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 AC145146.1-201ENST00000496370 254 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 MTCO3P28-201ENST00000513351 515 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 RNVU1-2-201ENST00000516326 135 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 SNORA18.6-201ENST00000516792 115 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 HSPE1P18-201ENST00000517602 280 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 AL512310.1-201ENST00000548639 172 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 MIR4703-201ENST00000577728 79 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 AL590229.1-201ENST00000603497 542 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 AC123912.5-201ENST00000605470 343 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 AC023510.2-201ENST00000622162 746 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 ZNF680P1-201ENST00000436625 1469 ntBASIC1.34□□□□□ -2.19
SLIRPQ9GZT3 RNU1-62P-201ENST00000362599 164 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 SNORD114-6-201ENST00000364393 72 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 SNORA12-201ENST00000391162 147 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 MIR934-201ENST00000401241 83 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 VN1R36P-201ENST00000414936 291 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 Z98742.3-201ENST00000418637 326 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 MTND2P18-201ENST00000419962 1030 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 MTCO3P46-201ENST00000425787 232 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 AC010975.2-201ENST00000427781 588 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 RPL7P54-201ENST00000438336 674 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 AL445567.1-201ENST00000439121 144 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 HMGN2P18-201ENST00000450680 270 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 ART2BP-201ENST00000453501 499 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 AC022364.2-201ENST00000457963 554 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 AC079382.1-201ENST00000493346 557 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 AC010486.1-201ENST00000511793 424 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 AC060788.1-201ENST00000521318 469 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 MTCO3P23-201ENST00000561363 289 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 AC012414.6-201ENST00000568241 401 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 MIR3198-2-201ENST00000577868 80 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 AL356157.2-201ENST00000605122 111 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 Z84480.1-201ENST00000605131 311 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 AC116312.1-201ENST00000606841 314 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 AL603755.1-201ENST00000619504 163 ntBASIC1.33□□□□□ -2.2
SLIRPQ9GZT3 IGHVIII-44-202ENST00000636235 289 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms