Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 RNU1-64P-201ENST00000365443 163 ntBASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 MIR141-201ENST00000384975 95 ntBASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 PTMAP5-201ENST00000393073 333 ntBASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 HSPE1P12-201ENST00000412576 301 ntBASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 AC099548.1-201ENST00000421443 426 ntBASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 Y_RNA.637-201ENST00000459424 114 ntBASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 AP000873.1-201ENST00000463987 400 ntBASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 SNORD116-25-201ENST00000516517 92 ntBASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 RNU6-928P-201ENST00000516876 104 ntBASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 AP002001.1-203ENST00000534002 267 ntBASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 AC006199.1-201ENST00000548728 219 ntBASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 SNRPGP20-201ENST00000604477 205 ntBASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 AC091953.5-201ENST00000622919 233 ntBASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 SNORD98-201ENST00000636377 67 ntBASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PHACTR1Q9C0D0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PHACTR1Q9C0D0 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
PHACTR1Q9C0D0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PHACTR1Q9C0D0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
PHACTR1Q9C0D0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 SNORA31-201ENST00000362607 130 ntBASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 Y_RNA.329-201ENST00000365209 107 ntBASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 SNORA18.3-201ENST00000384122 132 ntBASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 U3.26-201ENST00000391236 204 ntBASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 EI24P2-201ENST00000397776 1076 ntBASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 MIR208B-201ENST00000401172 77 ntBASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 AL138878.1-201ENST00000405131 347 ntBASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 SNORA3C-201ENST00000408792 125 ntBASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 AC096649.2-201ENST00000416186 393 ntBASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 RNA5SP73-201ENST00000516744 108 ntBASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 MIR3684-201ENST00000579779 74 ntBASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 AC005520.5-201ENST00000613926 164 ntBASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 uc_338.13-201ENST00000618243 179 ntBASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 Y_RNA.778-201ENST00000620203 90 ntBASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 AP005019.3-201ENST00000620418 560 ntBASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PHACTR1Q9C0D0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PHACTR1Q9C0D0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PHACTR1Q9C0D0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PHACTR1Q9C0D0 RNU6-727P-201ENST00000363592 107 ntBASIC4.32□□□□□ -1.72
PHACTR1Q9C0D0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
PHACTR1Q9C0D0 RN7SL481P-201ENST00000477764 299 ntBASIC4.32□□□□□ -1.72
PHACTR1Q9C0D0 RNU6-426P-201ENST00000516464 97 ntBASIC4.32□□□□□ -1.72
PHACTR1Q9C0D0 RNU2-12P-201ENST00000517216 168 ntBASIC4.32□□□□□ -1.72
PHACTR1Q9C0D0 AL360157.1-201ENST00000565962 87 ntBASIC4.32□□□□□ -1.72
PHACTR1Q9C0D0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.32□□□□□ -1.72
PHACTR1Q9C0D0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.32□□□□□ -1.72
PHACTR1Q9C0D0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PHACTR1Q9C0D0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.32□□□□□ -1.72
PHACTR1Q9C0D0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PHACTR1Q9C0D0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PHACTR1Q9C0D0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 RNU6-270P-201ENST00000364131 105 ntBASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 RNU6-151P-201ENST00000364158 107 ntBASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 RNU6-275P-201ENST00000364910 107 ntBASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 MIR192-201ENST00000384915 110 ntBASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 CYCSP48-201ENST00000417124 323 ntBASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 AL591419.1-201ENST00000427423 339 ntBASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 AC073264.2-201ENST00000448886 166 ntBASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 RPS20P10-201ENST00000451209 253 ntBASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 RN7SL354P-201ENST00000469282 294 ntBASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 AIG1P1-201ENST00000503376 148 ntBASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 AC100767.1-201ENST00000528178 123 ntBASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 TGIF1P1-201ENST00000558095 802 ntBASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 MIR3690-201ENST00000580266 75 ntBASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 AL162713.1-201ENST00000604480 262 ntBASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 AL365222.1-201ENST00000614661 98 ntBASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 MIR6780A-201ENST00000615089 68 ntBASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 AL078604.3-201ENST00000615580 211 ntBASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 AC140479.6-201ENST00000633535 357 ntBASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PHACTR1Q9C0D0 ZNF962P-201ENST00000443465 3140 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms