Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AL078596.1-201ENST00000624856 447 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 AC243829.7-201ENST00000633081 225 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 MTND5P16-201ENST00000460269 1703 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.81
TRIM55Q9BYV6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 MIR7-3-201ENST00000384898 110 ntBASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 AL358176.2-201ENST00000425769 204 ntBASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 MTND3P2-201ENST00000438452 342 ntBASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 PRSS3P4-201ENST00000453323 162 ntBASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 U8.22-201ENST00000459141 133 ntBASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 RAC1P2-201ENST00000511164 579 ntBASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 AC091144.1-201ENST00000519573 138 ntBASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 AC040926.1-201ENST00000530195 238 ntBASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 AC090617.3-201ENST00000573670 475 ntBASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 MIR3186-201ENST00000577404 85 ntBASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 MIR4765-201ENST00000585007 77 ntBASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 AC124312.5-201ENST00000604451 268 ntBASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 AL034555.1-201ENST00000604816 211 ntBASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 AC107294.3-201ENST00000609211 526 ntBASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 AC012314.7-201ENST00000619693 93 ntBASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 AC092628.2-201ENST00000622492 339 ntBASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 AC009093.8-201ENST00000641769 292 ntBASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 AP003122.5-201ENST00000527668 3766 ntBASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM55Q9BYV6 AC103988.1-201ENST00000566382 2177 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 Y_RNA.153-201ENST00000363615 91 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 Y_RNA.557-201ENST00000384680 107 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 RNU6-1105P-201ENST00000384774 107 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 MIR487A-201ENST00000385009 80 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 AL512633.1-201ENST00000399931 655 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 MTCO3P19-201ENST00000415864 321 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 RPL23AP83-201ENST00000434984 473 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 AC006539.3-201ENST00000454258 129 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 RPS29P12-201ENST00000460178 152 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 AL121594.1-201ENST00000475906 575 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 AC093852.1-201ENST00000503587 266 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 AC074250.1-201ENST00000511117 192 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 RNU1-95P-201ENST00000516357 160 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 RNU1-128P-201ENST00000516704 160 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 RNU6-567P-201ENST00000516746 107 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 CYCSP30-201ENST00000546447 172 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 AC027288.2-201ENST00000553028 243 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 TGIF1P1-201ENST00000558095 802 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 AL034408.1-202ENST00000636088 415 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 Z75746.1-201ENST00000440243 2080 ntBASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
TRIM55Q9BYV6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 RNU6-655P-201ENST00000362858 107 ntBASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 RNU6-1309P-201ENST00000363305 108 ntBASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 RNU6-1210P-201ENST00000363775 107 ntBASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 AC097463.2-201ENST00000421074 142 ntBASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 ARF4P2-201ENST00000430209 526 ntBASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 USP9YP16-201ENST00000430287 407 ntBASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 USP9YP23-201ENST00000455085 407 ntBASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 MTATP8P1-201ENST00000467115 207 ntBASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 AP000870.1-201ENST00000472927 406 ntBASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 SCARNA11.3-201ENST00000517276 130 ntBASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 AC026403.1-201ENST00000518938 295 ntBASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 AL117187.1-201ENST00000555482 181 ntBASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 AC087499.8-201ENST00000578406 226 ntBASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM55Q9BYV6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 RNU6-1159P-201ENST00000362933 107 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 RNU4-56P-201ENST00000364700 142 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 Y_RNA.319-201ENST00000365138 92 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 SNORA5A-201ENST00000384111 134 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 Y_RNA.526-201ENST00000384572 110 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 RPL21P75-201ENST00000396599 483 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 UBA52P6-201ENST00000399822 382 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms