Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
SCAPERQ9BY12 AC093913.1-201ENST00000614178 329 ntBASIC0.12□□□□□ -2.39
SCAPERQ9BY12 AC009032.1-201ENST00000617574 431 ntBASIC0.12□□□□□ -2.39
SCAPERQ9BY12 MIR338-201ENST00000636369 67 ntBASIC0.12□□□□□ -2.39
SCAPERQ9BY12 LINC02555-201ENST00000563933 1951 ntBASIC0.12□□□□□ -2.39
SCAPERQ9BY12 AC090625.1-201ENST00000357130 210 ntBASIC0.11□□□□□ -2.39
SCAPERQ9BY12 RNU6-1237P-201ENST00000384777 107 ntBASIC0.11□□□□□ -2.39
SCAPERQ9BY12 MIR329-1-201ENST00000385028 80 ntBASIC0.11□□□□□ -2.39
SCAPERQ9BY12 MTCO3P1-205ENST00000422088 832 ntBASIC0.11□□□□□ -2.39
SCAPERQ9BY12 AC104651.1-201ENST00000427559 735 ntBASIC0.11□□□□□ -2.39
SCAPERQ9BY12 GTF2IP3-201ENST00000433887 494 ntBASIC0.11□□□□□ -2.39
SCAPERQ9BY12 AC002542.1-201ENST00000440683 193 ntBASIC0.11□□□□□ -2.39
SCAPERQ9BY12 OFD1P3Y-201ENST00000453312 783 ntBASIC0.11□□□□□ -2.39
SCAPERQ9BY12 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.11□□□□□ -2.39
SCAPERQ9BY12 AC079140.3-201ENST00000511111 550 ntBASIC0.11□□□□□ -2.39
SCAPERQ9BY12 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.11□□□□□ -2.39
SCAPERQ9BY12 AC104417.1-201ENST00000523974 751 ntBASIC0.11□□□□□ -2.39
SCAPERQ9BY12 MIR4667-201ENST00000578933 66 ntBASIC0.11□□□□□ -2.39
SCAPERQ9BY12 AC017083.3-201ENST00000609955 700 ntBASIC0.11□□□□□ -2.39
SCAPERQ9BY12 RNU6-349P-201ENST00000362402 107 ntBASIC0.1□□□□□ -2.39
SCAPERQ9BY12 RNU6-655P-201ENST00000362858 107 ntBASIC0.1□□□□□ -2.39
SCAPERQ9BY12 RNU6-898P-201ENST00000365627 104 ntBASIC0.1□□□□□ -2.39
SCAPERQ9BY12 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.1□□□□□ -2.39
SCAPERQ9BY12 CBX3P9-201ENST00000402326 552 ntBASIC0.1□□□□□ -2.39
SCAPERQ9BY12 AL133264.1-201ENST00000407157 562 ntBASIC0.1□□□□□ -2.39
SCAPERQ9BY12 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.1□□□□□ -2.39
SCAPERQ9BY12 TXNL1P1-201ENST00000429528 554 ntBASIC0.1□□□□□ -2.39
SCAPERQ9BY12 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.1□□□□□ -2.39
SCAPERQ9BY12 AC026410.2-201ENST00000460281 156 ntBASIC0.1□□□□□ -2.39
SCAPERQ9BY12 RPL37P6-201ENST00000460682 294 ntBASIC0.1□□□□□ -2.39
SCAPERQ9BY12 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.1□□□□□ -2.39
SCAPERQ9BY12 SNORA31.2-201ENST00000516019 134 ntBASIC0.1□□□□□ -2.39
SCAPERQ9BY12 SNORD79.1-201ENST00000516069 84 ntBASIC0.1□□□□□ -2.39
SCAPERQ9BY12 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.1□□□□□ -2.39
SCAPERQ9BY12 VN1R83P-201ENST00000595685 445 ntBASIC0.1□□□□□ -2.39
SCAPERQ9BY12 AL590229.1-201ENST00000603497 542 ntBASIC0.1□□□□□ -2.39
SCAPERQ9BY12 AC091946.2-201ENST00000606105 291 ntBASIC0.1□□□□□ -2.39
SCAPERQ9BY12 RNU6-87P-201ENST00000607561 108 ntBASIC0.1□□□□□ -2.39
SCAPERQ9BY12 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.1□□□□□ -2.39
SCAPERQ9BY12 AC009268.2-201ENST00000621925 457 ntBASIC0.1□□□□□ -2.39
SCAPERQ9BY12 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.1□□□□□ -2.39
SCAPERQ9BY12 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.1□□□□□ -2.39
SCAPERQ9BY12 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.09□□□□□ -2.4
SCAPERQ9BY12 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.09□□□□□ -2.4
SCAPERQ9BY12 RAB28P5-201ENST00000427490 651 ntBASIC0.09□□□□□ -2.4
SCAPERQ9BY12 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.09□□□□□ -2.4
SCAPERQ9BY12 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.09□□□□□ -2.4
SCAPERQ9BY12 AC020550.1-201ENST00000447385 163 ntBASIC0.09□□□□□ -2.4
SCAPERQ9BY12 AC113410.1-201ENST00000505029 247 ntBASIC0.09□□□□□ -2.4
SCAPERQ9BY12 AC105758.1-201ENST00000506038 399 ntBASIC0.09□□□□□ -2.4
SCAPERQ9BY12 AC110760.3-202ENST00000515177 371 ntBASIC0.09□□□□□ -2.4
SCAPERQ9BY12 AF038458.1-201ENST00000588406 262 ntBASIC0.09□□□□□ -2.4
SCAPERQ9BY12 KATNBL1P5-201ENST00000605015 517 ntBASIC0.09□□□□□ -2.4
SCAPERQ9BY12 TUG1_2.1-201ENST00000614234 87 ntBASIC0.09□□□□□ -2.4
SCAPERQ9BY12 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
SCAPERQ9BY12 RNU6-223P-201ENST00000362830 107 ntBASIC0.08□□□□□ -2.4
SCAPERQ9BY12 SNORA27.3-201ENST00000364937 134 ntBASIC0.08□□□□□ -2.4
SCAPERQ9BY12 Y_RNA.518-201ENST00000384552 113 ntBASIC0.08□□□□□ -2.4
SCAPERQ9BY12 RNU1-119P-201ENST00000391122 165 ntBASIC0.08□□□□□ -2.4
SCAPERQ9BY12 AL590084.2-201ENST00000401481 382 ntBASIC0.08□□□□□ -2.4
SCAPERQ9BY12 MTCO2P31-201ENST00000402702 684 ntBASIC0.08□□□□□ -2.4
SCAPERQ9BY12 RNU6-1054P-201ENST00000411293 104 ntBASIC0.08□□□□□ -2.4
SCAPERQ9BY12 Z95118.1-201ENST00000421372 247 ntBASIC0.08□□□□□ -2.4
SCAPERQ9BY12 RSL24D1P8-201ENST00000434442 492 ntBASIC0.08□□□□□ -2.4
SCAPERQ9BY12 MTND1P9-201ENST00000453775 944 ntBASIC0.08□□□□□ -2.4
SCAPERQ9BY12 BTF3P15-201ENST00000455606 336 ntBASIC0.08□□□□□ -2.4
SCAPERQ9BY12 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.08□□□□□ -2.4
SCAPERQ9BY12 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.08□□□□□ -2.4
SCAPERQ9BY12 RN7SKP12-201ENST00000516275 143 ntBASIC0.08□□□□□ -2.4
SCAPERQ9BY12 AP001981.2-201ENST00000603241 418 ntBASIC0.08□□□□□ -2.4
SCAPERQ9BY12 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.08□□□□□ -2.4
SCAPERQ9BY12 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
SCAPERQ9BY12 RNU6-1210P-201ENST00000363775 107 ntBASIC0.07□□□□□ -2.4
SCAPERQ9BY12 RNU6-188P-201ENST00000364207 107 ntBASIC0.07□□□□□ -2.4
SCAPERQ9BY12 RNU6-331P-201ENST00000384724 107 ntBASIC0.07□□□□□ -2.4
SCAPERQ9BY12 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.07□□□□□ -2.4
SCAPERQ9BY12 MTCO2P5-201ENST00000422621 426 ntBASIC0.07□□□□□ -2.4
SCAPERQ9BY12 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.07□□□□□ -2.4
SCAPERQ9BY12 RPS26P45-201ENST00000471748 340 ntBASIC0.07□□□□□ -2.4
SCAPERQ9BY12 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.07□□□□□ -2.4
SCAPERQ9BY12 AC022493.2-201ENST00000506122 481 ntBASIC0.07□□□□□ -2.4
SCAPERQ9BY12 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.07□□□□□ -2.4
SCAPERQ9BY12 AC022861.1-201ENST00000522981 663 ntBASIC0.07□□□□□ -2.4
SCAPERQ9BY12 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.07□□□□□ -2.4
SCAPERQ9BY12 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.07□□□□□ -2.4
SCAPERQ9BY12 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.07□□□□□ -2.4
SCAPERQ9BY12 AC012557.2-201ENST00000605919 418 ntBASIC0.07□□□□□ -2.4
SCAPERQ9BY12 AC107905.1-201ENST00000616204 426 ntBASIC0.07□□□□□ -2.4
SCAPERQ9BY12 AC126177.8-201ENST00000618339 1015 ntBASIC0.07□□□□□ -2.4
SCAPERQ9BY12 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.07□□□□□ -2.4
SCAPERQ9BY12 RNU6-28P-201ENST00000362378 107 ntBASIC0.06□□□□□ -2.4
SCAPERQ9BY12 RNU6-40P-201ENST00000384254 107 ntBASIC0.06□□□□□ -2.4
SCAPERQ9BY12 RNU6-1176P-201ENST00000390955 107 ntBASIC0.06□□□□□ -2.4
SCAPERQ9BY12 RPS3AP36-201ENST00000398190 775 ntBASIC0.06□□□□□ -2.4
SCAPERQ9BY12 MIR1295A-201ENST00000408463 79 ntBASIC0.06□□□□□ -2.4
SCAPERQ9BY12 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.06□□□□□ -2.4
SCAPERQ9BY12 AL139421.1-201ENST00000423010 169 ntBASIC0.06□□□□□ -2.4
SCAPERQ9BY12 AL035398.1-201ENST00000430869 322 ntBASIC0.06□□□□□ -2.4
SCAPERQ9BY12 MTCYBP15-201ENST00000433123 1127 ntBASIC0.06□□□□□ -2.4
SCAPERQ9BY12 AL008629.1-201ENST00000438615 184 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms