Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 FER-210ENST00000628534 558 ntTSL 5 BASIC1.72□□□□□ -2.13
RSPO3Q9BXY4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
RSPO3Q9BXY4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
RSPO3Q9BXY4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 AL356292.1-201ENST00000283110 373 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 RNU6-778P-201ENST00000363269 103 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 Y_RNA.167-201ENST00000363735 109 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 RNY3P3-201ENST00000363816 102 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 RNU6-884P-201ENST00000363889 107 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 RNU6-1303P-201ENST00000364841 107 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 Y_RNA.295-201ENST00000364918 102 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 RNU6-715P-201ENST00000365204 103 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 Z98749.2-208ENST00000381646 500 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 SNORA16.2-201ENST00000390991 127 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 RNU2-29P-201ENST00000410423 189 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 RNU6-387P-201ENST00000411331 105 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 RNA5SP111-201ENST00000411386 101 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 OR9R1P-201ENST00000412200 877 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 EIF1AXP1-201ENST00000419267 435 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 RPL36AP53-201ENST00000432891 316 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 MTATP6P13-201ENST00000438531 667 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 MTND3P16-201ENST00000452205 344 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 SCARNA18-201ENST00000459004 134 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 MTCO3P38-201ENST00000468910 766 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 AC055731.1-201ENST00000474387 401 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 RN7SL274P-201ENST00000492268 272 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 AC112206.3-201ENST00000514578 389 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 SCARNA17.1-201ENST00000516211 143 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 SCARNA17.2-201ENST00000516334 143 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 RNU6-1315P-201ENST00000517187 99 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 MIR1273C-201ENST00000578669 77 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 AC010525.2-201ENST00000590920 195 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 MTND4LP5-201ENST00000605152 292 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 SCARNA17.4-201ENST00000614296 143 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 AC002553.4-201ENST00000616896 331 ntBASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RSPO3Q9BXY4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 MIR9-3-201ENST00000385084 90 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 MIR1277-201ENST00000408536 78 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 RNU2-68P-201ENST00000410878 191 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 AC023141.4-201ENST00000412031 328 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 RPL21P90-201ENST00000415692 466 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 RPL30P16-201ENST00000419341 429 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 ZNF863P-201ENST00000426746 417 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 MTND1P2-201ENST00000430604 821 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 MRPS10P2-201ENST00000431226 381 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 RPL38P4-201ENST00000502376 214 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 MTND3P25-201ENST00000509243 135 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 RNU1-86P-201ENST00000516108 154 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 RNU1-107P-201ENST00000516617 154 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 RNU6-1178P-201ENST00000516674 107 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 RNA5SP364-201ENST00000516938 78 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 RNU6-703P-201ENST00000516946 107 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 AL137161.1-201ENST00000532231 390 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 AL391261.3-201ENST00000557194 520 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 MIR4498-201ENST00000577599 66 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 AC104458.1-201ENST00000608243 463 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 uc_338.20-201ENST00000621563 178 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 MTND4P14-201ENST00000435799 1354 ntBASIC1.7□□□□□ -2.14
RSPO3Q9BXY4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.69□□□□□ -2.14
RSPO3Q9BXY4 RNU6-384P-201ENST00000364900 104 ntBASIC1.69□□□□□ -2.14
RSPO3Q9BXY4 Y_RNA.378-201ENST00000365652 113 ntBASIC1.69□□□□□ -2.14
RSPO3Q9BXY4 MIR514A2-201ENST00000385131 88 ntBASIC1.69□□□□□ -2.14
RSPO3Q9BXY4 MIR514A3-201ENST00000385132 88 ntBASIC1.69□□□□□ -2.14
RSPO3Q9BXY4 SNORD70.1-201ENST00000391007 85 ntBASIC1.69□□□□□ -2.14
RSPO3Q9BXY4 AC019129.1-201ENST00000403786 261 ntBASIC1.69□□□□□ -2.14
RSPO3Q9BXY4 RNU2-3P-201ENST00000410144 191 ntBASIC1.69□□□□□ -2.14
RSPO3Q9BXY4 RNU6-1025P-201ENST00000410629 104 ntBASIC1.69□□□□□ -2.14
RSPO3Q9BXY4 Y_RNA.615-201ENST00000410769 117 ntBASIC1.69□□□□□ -2.14
RSPO3Q9BXY4 RNU6-1148P-201ENST00000410992 104 ntBASIC1.69□□□□□ -2.14
RSPO3Q9BXY4 CYCSP33-201ENST00000414485 327 ntBASIC1.69□□□□□ -2.14
RSPO3Q9BXY4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.69□□□□□ -2.14
RSPO3Q9BXY4 EIF4EP4-201ENST00000424916 578 ntBASIC1.69□□□□□ -2.14
RSPO3Q9BXY4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.69□□□□□ -2.14
RSPO3Q9BXY4 SEPT14P3-201ENST00000439401 183 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms