Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.31□□□□□ -1.72
TRAIPQ9BWF2 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.31□□□□□ -1.72
TRAIPQ9BWF2 SNORA50A-202ENST00000629536 136 ntBASIC4.31□□□□□ -1.72
TRAIPQ9BWF2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRAIPQ9BWF2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TRAIPQ9BWF2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRAIPQ9BWF2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.3□□□□□ -1.72
TRAIPQ9BWF2 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.3□□□□□ -1.72
TRAIPQ9BWF2 EIF1P2-201ENST00000428233 350 ntBASIC4.3□□□□□ -1.72
TRAIPQ9BWF2 AC007215.1-201ENST00000464893 276 ntBASIC4.3□□□□□ -1.72
TRAIPQ9BWF2 SNORA25.14-201ENST00000516481 132 ntBASIC4.3□□□□□ -1.72
TRAIPQ9BWF2 AP002770.2-201ENST00000543613 532 ntBASIC4.3□□□□□ -1.72
TRAIPQ9BWF2 AC093023.1-201ENST00000547375 507 ntBASIC4.3□□□□□ -1.72
TRAIPQ9BWF2 AC008269.2-201ENST00000561915 1105 ntBASIC4.3□□□□□ -1.72
TRAIPQ9BWF2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.3□□□□□ -1.72
TRAIPQ9BWF2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.3□□□□□ -1.72
TRAIPQ9BWF2 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
TRAIPQ9BWF2 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRAIPQ9BWF2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
TRAIPQ9BWF2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
TRAIPQ9BWF2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 RNU6-1309P-201ENST00000363305 108 ntBASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 RNU6-245P-201ENST00000384020 107 ntBASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 MIR449B-201ENST00000384995 97 ntBASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 SNORD78.2-201ENST00000391076 69 ntBASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 SNORA57.3-201ENST00000411095 141 ntBASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 AL513477.1-202ENST00000417061 214 ntBASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 AC002075.2-201ENST00000425207 252 ntBASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 RPL30P4-201ENST00000429309 333 ntBASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 MTND3P2-201ENST00000438452 342 ntBASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 AC096638.1-201ENST00000444678 216 ntBASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 U8.20-201ENST00000459445 131 ntBASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 AC023141.11-201ENST00000508864 202 ntBASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 RNU6-1046P-201ENST00000516538 107 ntBASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 SNORA40.15-201ENST00000516884 107 ntBASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 UBL5P4-201ENST00000562584 236 ntBASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 AC105245.1-201ENST00000581934 244 ntBASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 AL121772.2-201ENST00000614331 297 ntBASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 AC008121.3-201ENST00000618726 433 ntBASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRAIPQ9BWF2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 Y_RNA.149-201ENST00000363558 117 ntBASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 Y_RNA.176-201ENST00000363815 109 ntBASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 MIR30B-201ENST00000384850 88 ntBASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 MIR10B-201ENST00000385011 110 ntBASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 SNORA46.1-201ENST00000391069 153 ntBASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 MIR1302-3-201ENST00000408128 138 ntBASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 MIR1251-201ENST00000408552 70 ntBASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 RN7SKP156-201ENST00000410308 342 ntBASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 AC126124.2-201ENST00000413542 321 ntBASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 U8.22-201ENST00000459141 133 ntBASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 AC146507.2-201ENST00000460608 476 ntBASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 AC131281.1-201ENST00000522984 164 ntBASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 AL117187.1-201ENST00000555482 181 ntBASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 AC090517.1-201ENST00000569307 266 ntBASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 AL121655.1-201ENST00000605811 308 ntBASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 MIR5739-201ENST00000619803 80 ntBASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.28□□□□□ -1.72
TRAIPQ9BWF2 BX322639.1-202ENST00000423987 2213 ntBASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 RNU6-1301P-201ENST00000362724 104 ntBASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 RNA5SP124-201ENST00000362739 110 ntBASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 RNA5SP97-201ENST00000365006 84 ntBASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 MIR487A-201ENST00000385009 80 ntBASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 MIR199A2-201ENST00000385289 110 ntBASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 RNA5SP201-201ENST00000410316 124 ntBASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 SDAD1P3-201ENST00000427380 333 ntBASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 AL445305.1-201ENST00000432577 575 ntBASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 AC112220.1-201ENST00000434628 355 ntBASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 RPL31P61-201ENST00000496160 376 ntBASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 MRPS35P2-201ENST00000508242 191 ntBASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 AP002404.1-201ENST00000532005 451 ntBASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 Y_RNA.772-201ENST00000606692 102 ntBASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 AL021879.1-201ENST00000611756 288 ntBASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 AL773545.4-201ENST00000637262 310 ntBASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 AL513478.4-201ENST00000641636 310 ntBASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRAIPQ9BWF2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRAIPQ9BWF2 FAM35DP-201ENST00000323387 2712 ntBASIC4.26□□□□□ -1.73
TRAIPQ9BWF2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRAIPQ9BWF2 RNU6-873P-201ENST00000363833 107 ntBASIC4.26□□□□□ -1.73
TRAIPQ9BWF2 U8.11-201ENST00000384699 133 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms