Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 RNA5SP503-201ENST00000517047 117 ntBASIC1.34□□□□□ -2.19
SHANK2-AS3Q9BTD1 MTND2P38-201ENST00000522536 667 ntBASIC1.34□□□□□ -2.19
SHANK2-AS3Q9BTD1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.34□□□□□ -2.19
SHANK2-AS3Q9BTD1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.34□□□□□ -2.19
SHANK2-AS3Q9BTD1 SUB1P2-201ENST00000556401 297 ntBASIC1.34□□□□□ -2.19
SHANK2-AS3Q9BTD1 AC006362.1-201ENST00000567392 174 ntBASIC1.34□□□□□ -2.19
SHANK2-AS3Q9BTD1 AC104581.2-201ENST00000572227 430 ntBASIC1.34□□□□□ -2.19
SHANK2-AS3Q9BTD1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.34□□□□□ -2.19
SHANK2-AS3Q9BTD1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.34□□□□□ -2.19
SHANK2-AS3Q9BTD1 AC078795.2-201ENST00000602835 1252 ntBASIC1.34□□□□□ -2.19
SHANK2-AS3Q9BTD1 AC008945.2-201ENST00000606056 604 ntBASIC1.34□□□□□ -2.19
SHANK2-AS3Q9BTD1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SHANK2-AS3Q9BTD1 uc_338.11-201ENST00000619132 160 ntBASIC1.34□□□□□ -2.19
SHANK2-AS3Q9BTD1 AC022418.1-201ENST00000624118 445 ntBASIC1.34□□□□□ -2.19
SHANK2-AS3Q9BTD1 AC005609.4-201ENST00000625071 447 ntBASIC1.34□□□□□ -2.19
SHANK2-AS3Q9BTD1 AC090582.1-201ENST00000636321 199 ntBASIC1.34□□□□□ -2.19
SHANK2-AS3Q9BTD1 U6.114-201ENST00000636407 96 ntBASIC1.34□□□□□ -2.19
SHANK2-AS3Q9BTD1 U4.7-201ENST00000638126 106 ntBASIC1.34□□□□□ -2.19
SHANK2-AS3Q9BTD1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.34□□□□□ -2.2
SHANK2-AS3Q9BTD1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 Y_RNA.399-201ENST00000383955 105 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 RNU6-1119P-201ENST00000384349 108 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 SNORA8-201ENST00000384574 139 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 MIR9-3-201ENST00000385084 90 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 RNU6-1158P-201ENST00000391167 107 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 AL079342.1-201ENST00000401460 267 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 AL356432.1-201ENST00000405809 419 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 MIR1294-201ENST00000408503 142 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 RNU2-9P-201ENST00000410194 145 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 OR9R1P-201ENST00000412200 877 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 BTF3L4P1-201ENST00000413813 468 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 AC244636.1-201ENST00000421152 228 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 AL645568.3-201ENST00000433683 316 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 IFNA20P-201ENST00000436840 528 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 RPL23AP6-201ENST00000446637 472 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 MTCO2P18-201ENST00000457151 658 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 RPL31P3-201ENST00000458430 332 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 RNU7-180P-201ENST00000459240 63 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 AL121594.1-201ENST00000475906 575 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 TRBV12-1-201ENST00000479785 344 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 RPS29P11-201ENST00000496507 171 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 AC108078.1-201ENST00000508073 725 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 AC105417.1-201ENST00000514691 285 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 LRRC34P2-201ENST00000514850 553 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 RNA5SP182-201ENST00000516064 82 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 HSBP1P1-201ENST00000555205 166 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 AGGF1P4-201ENST00000568249 801 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 DEFB122-202ENST00000569013 197 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 MTATP6P3-201ENST00000581686 676 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 MIR4424-201ENST00000585257 86 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 AL078605.1-201ENST00000603529 500 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 AC123912.5-201ENST00000605470 343 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 AC087241.4-201ENST00000612441 480 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 AC026585.1-201ENST00000619582 524 ntBASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.33□□□□□ -2.2
SHANK2-AS3Q9BTD1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 RNU6-393P-201ENST00000384475 107 ntBASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 RNU6-1274P-201ENST00000384557 107 ntBASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 SNORD70.1-201ENST00000391007 85 ntBASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 Y_RNA.582-201ENST00000391023 95 ntBASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 RNU2-29P-201ENST00000410423 189 ntBASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 HMGB1P31-201ENST00000437242 427 ntBASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 MTND1P29-201ENST00000448112 647 ntBASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 AC073415.1-201ENST00000449240 153 ntBASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 AL353752.1-201ENST00000454946 260 ntBASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 HMGB1P29-201ENST00000505659 499 ntBASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 MTCO3P7-201ENST00000510008 774 ntBASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 AP005639.2-201ENST00000527592 928 ntBASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 AP000763.2-201ENST00000540641 163 ntBASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 AC110588.1-201ENST00000559699 137 ntBASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 MIR5583-1-201ENST00000580941 59 ntBASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 AC010928.2-201ENST00000588017 287 ntBASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 RN7SKP299-201ENST00000606679 301 ntBASIC1.32□□□□□ -2.2
SHANK2-AS3Q9BTD1 Y_RNA.51-201ENST00000362725 102 ntBASIC1.31□□□□□ -2.2
SHANK2-AS3Q9BTD1 RNU6-655P-201ENST00000362858 107 ntBASIC1.31□□□□□ -2.2
SHANK2-AS3Q9BTD1 RNU6-552P-201ENST00000362869 119 ntBASIC1.31□□□□□ -2.2
SHANK2-AS3Q9BTD1 RNU6-1285P-201ENST00000363480 105 ntBASIC1.31□□□□□ -2.2
SHANK2-AS3Q9BTD1 RNU4-42P-201ENST00000364738 142 ntBASIC1.31□□□□□ -2.2
SHANK2-AS3Q9BTD1 RNU6-611P-201ENST00000384276 104 ntBASIC1.31□□□□□ -2.2
SHANK2-AS3Q9BTD1 CBX3P9-201ENST00000402326 552 ntBASIC1.31□□□□□ -2.2
SHANK2-AS3Q9BTD1 MIR1283-2-201ENST00000408621 87 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms