Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 OR11H5P-201ENST00000554039 926 ntBASIC1.95□□□□□ -2.1
EBF4Q9BQW3 MIR5089-201ENST00000580047 84 ntBASIC1.95□□□□□ -2.1
EBF4Q9BQW3 MIR4765-201ENST00000585007 77 ntBASIC1.95□□□□□ -2.1
EBF4Q9BQW3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.95□□□□□ -2.1
EBF4Q9BQW3 AL670379.10-201ENST00000604330 253 ntBASIC1.95□□□□□ -2.1
EBF4Q9BQW3 AL670379.9-201ENST00000605428 253 ntBASIC1.95□□□□□ -2.1
EBF4Q9BQW3 uc_338.14-201ENST00000613162 166 ntBASIC1.95□□□□□ -2.1
EBF4Q9BQW3 RMST_4.1-201ENST00000616886 107 ntBASIC1.95□□□□□ -2.1
EBF4Q9BQW3 uc_338.34-201ENST00000617467 174 ntBASIC1.95□□□□□ -2.1
EBF4Q9BQW3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.95□□□□□ -2.1
EBF4Q9BQW3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.95□□□□□ -2.1
EBF4Q9BQW3 AP003400.5-201ENST00000624827 617 ntBASIC1.95□□□□□ -2.1
EBF4Q9BQW3 AL133216.2-202ENST00000634512 349 ntBASIC1.95□□□□□ -2.1
EBF4Q9BQW3 MTND4P27-201ENST00000450813 1354 ntBASIC1.95□□□□□ -2.1
EBF4Q9BQW3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.95□□□□□ -2.1
EBF4Q9BQW3 AL359854.1-201ENST00000614203 1594 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.94□□□□□ -2.1
EBF4Q9BQW3 RNU1-72P-201ENST00000362976 153 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 RNU6-1252P-201ENST00000363054 104 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 Y_RNA.231-201ENST00000364358 102 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 Y_RNA.279-201ENST00000364763 95 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 SNORA32.2-201ENST00000384049 122 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 RNU6-45P-201ENST00000384471 107 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
EBF4Q9BQW3 SNORD37.1-201ENST00000390968 65 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 AL023284.1-201ENST00000403956 276 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 RNA5SP489-201ENST00000410986 109 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 AC022028.1-201ENST00000412054 408 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.94□□□□□ -2.1
EBF4Q9BQW3 SNRPEP8-201ENST00000442866 260 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.94□□□□□ -2.1
EBF4Q9BQW3 PMCHL2-203ENST00000457791 237 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 SNRPFP3-201ENST00000457792 225 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 MED28P2-201ENST00000475771 317 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.94□□□□□ -2.1
EBF4Q9BQW3 AC025465.4-201ENST00000513422 638 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 MIR892C-201ENST00000516410 77 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 SNORD60.2-201ENST00000516883 86 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 SNORA31.18-201ENST00000517043 134 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 SCARNA3-201ENST00000517097 143 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.94□□□□□ -2.1
EBF4Q9BQW3 IGKV3-31-201ENST00000523109 329 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 AC010186.2-204ENST00000537668 439 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.94□□□□□ -2.1
EBF4Q9BQW3 SCOCP1-201ENST00000554676 349 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 AC018638.8-201ENST00000588755 281 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.94□□□□□ -2.1
EBF4Q9BQW3 BNIP3P10-201ENST00000605360 577 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 AC005000.2-201ENST00000605468 310 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 AC092807.2-201ENST00000609367 243 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 AC009033.1-201ENST00000624279 431 ntBASIC1.94□□□□□ -2.1
EBF4Q9BQW3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.94□□□□□ -2.1
EBF4Q9BQW3 KPNA2P1-201ENST00000458289 1591 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 RNU6-858P-201ENST00000362436 107 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 RNU6-831P-201ENST00000384548 107 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 MIR483-201ENST00000385070 76 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 SNORA11.4-201ENST00000408823 129 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 RNU6-607P-201ENST00000411283 108 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 AL513185.2-201ENST00000425543 193 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 GPM6BP3-201ENST00000442797 145 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 RNU7-66P-201ENST00000459469 62 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 AC112771.1-201ENST00000463581 102 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 DYNLL1P5-201ENST00000467158 270 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 RPL38P4-201ENST00000502376 214 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 RNU6-875P-201ENST00000516488 106 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 SNRPGP18-201ENST00000553000 214 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 MIR5692A1-201ENST00000580523 69 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 BNIP3P25-201ENST00000596023 559 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 AL121757.2-201ENST00000611223 313 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 AC104260.1-201ENST00000616660 539 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 RBBP8P1-201ENST00000449447 1844 ntBASIC1.93□□□□□ -2.1
EBF4Q9BQW3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.93□□□□□ -2.1
EBF4Q9BQW3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.92□□□□□ -2.1
EBF4Q9BQW3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
EBF4Q9BQW3 RNU6-525P-201ENST00000363685 104 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 AL078595.1-201ENST00000404458 226 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 RNU4-46P-201ENST00000410818 138 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 RPL21P111-201ENST00000418453 477 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 ERLEC1P1-201ENST00000433806 578 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms