Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.14□□□□□ -1.91
VRK1Q99986 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.14□□□□□ -1.91
VRK1Q99986 VN1R91P-201ENST00000594377 169 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 AC136443.5-201ENST00000603741 370 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 AC016727.2-201ENST00000603988 621 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 AL359198.2-201ENST00000611836 194 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 AL162373.1-201ENST00000620433 407 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.14□□□□□ -1.91
VRK1Q99986 AC243829.7-201ENST00000633081 225 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VRK1Q99986 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VRK1Q99986 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VRK1Q99986 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VRK1Q99986 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VRK1Q99986 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.14□□□□□ -1.91
VRK1Q99986 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.13□□□□□ -1.91
VRK1Q99986 AC058791.1-201ENST00000608412 3198 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VRK1Q99986 RNU6-1027P-201ENST00000383998 107 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
VRK1Q99986 U3.26-201ENST00000391236 204 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
VRK1Q99986 AL512633.1-201ENST00000399931 655 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 RNU6-1140P-201ENST00000410517 106 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 Y_RNA.605-201ENST00000410577 105 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 AC113618.1-201ENST00000416747 285 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.13□□□□□ -1.91
VRK1Q99986 MTND5P22-201ENST00000458380 195 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 AC010401.1-201ENST00000463867 348 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 AC087477.1-201ENST00000465747 340 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 HMGN1P10-201ENST00000474557 553 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 AC006483.1-201ENST00000487308 313 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.13□□□□□ -1.91
VRK1Q99986 AC021146.2-201ENST00000504736 556 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.13□□□□□ -1.91
VRK1Q99986 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.13□□□□□ -1.91
VRK1Q99986 AC110768.1-201ENST00000509222 400 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.13□□□□□ -1.91
VRK1Q99986 AC079598.5-201ENST00000547460 117 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.13□□□□□ -1.91
VRK1Q99986 MIR3136-201ENST00000583498 78 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 AC104695.3-201ENST00000604052 296 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 AL137843.1-201ENST00000605078 385 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 UCA1.1-201ENST00000620952 75 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.13□□□□□ -1.91
VRK1Q99986 AP000553.6-201ENST00000641242 118 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
VRK1Q99986 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
VRK1Q99986 FAM35CP-201ENST00000554755 2470 ntBASIC3.13□□□□□ -1.91
VRK1Q99986 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VRK1Q99986 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.12□□□□□ -1.91
VRK1Q99986 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.12□□□□□ -1.91
VRK1Q99986 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VRK1Q99986 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.12□□□□□ -1.91
VRK1Q99986 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.12□□□□□ -1.91
VRK1Q99986 RNU6-874P-201ENST00000362390 105 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 RNU6-529P-201ENST00000363383 104 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 Y_RNA.333-201ENST00000365274 102 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 AP002088.1-201ENST00000382740 395 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 Y_RNA.592-201ENST00000410274 109 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 ATP5A1P2-201ENST00000412323 255 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 AL353705.1-201ENST00000433468 480 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.12□□□□□ -1.91
VRK1Q99986 SNORD105B-201ENST00000458770 79 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 snoU13.22-201ENST00000459428 104 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 RN7SL442P-201ENST00000473804 320 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 AIG1P1-201ENST00000503376 148 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 AC093852.1-201ENST00000503587 266 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.12□□□□□ -1.91
VRK1Q99986 RNU6-764P-201ENST00000516396 105 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 RNU6-567P-201ENST00000516746 107 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 AC091144.1-201ENST00000519573 138 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 MIR3922-201ENST00000585192 84 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 RNU1-30P-201ENST00000606575 163 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 AC099654.7-201ENST00000635788 2127 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VRK1Q99986 AC091812.1-201ENST00000432235 1948 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VRK1Q99986 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.12□□□□□ -1.91
VRK1Q99986 AL513302.2-201ENST00000562313 1842 ntBASIC3.12□□□□□ -1.91
VRK1Q99986 RNU1-75P-201ENST00000347264 129 ntBASIC3.11□□□□□ -1.91
VRK1Q99986 RNA5SP50-201ENST00000363731 107 ntBASIC3.11□□□□□ -1.91
VRK1Q99986 SNORA70.4-201ENST00000365509 134 ntBASIC3.11□□□□□ -1.91
VRK1Q99986 DYNLT3P1-201ENST00000378574 347 ntBASIC3.11□□□□□ -1.91
VRK1Q99986 Y_RNA.455-201ENST00000384230 98 ntBASIC3.11□□□□□ -1.91
VRK1Q99986 Y_RNA.485-201ENST00000384395 102 ntBASIC3.11□□□□□ -1.91
VRK1Q99986 MIR153-2-201ENST00000385225 87 ntBASIC3.11□□□□□ -1.91
VRK1Q99986 MIR23A-201ENST00000385245 73 ntBASIC3.11□□□□□ -1.91
VRK1Q99986 SNORA11.1-201ENST00000408133 129 ntBASIC3.11□□□□□ -1.91
VRK1Q99986 BX679664.1-201ENST00000434429 253 ntBASIC3.11□□□□□ -1.91
VRK1Q99986 RPS27P29-201ENST00000463110 252 ntBASIC3.11□□□□□ -1.91
VRK1Q99986 RN7SL293P-201ENST00000481765 281 ntBASIC3.11□□□□□ -1.91
VRK1Q99986 RPL36AP48-201ENST00000485521 314 ntBASIC3.11□□□□□ -1.91
VRK1Q99986 SNORA31.6-201ENST00000516241 130 ntBASIC3.11□□□□□ -1.91
VRK1Q99986 MIR2355-201ENST00000517199 87 ntBASIC3.11□□□□□ -1.91
VRK1Q99986 SCARNA11.3-201ENST00000517276 130 ntBASIC3.11□□□□□ -1.91
VRK1Q99986 AC022616.4-201ENST00000522985 181 ntBASIC3.11□□□□□ -1.91
VRK1Q99986 HSBP1P1-201ENST00000555205 166 ntBASIC3.11□□□□□ -1.91
VRK1Q99986 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms