Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RNA5SP276-201ENST00000362580 94 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SSX3Q99909 RNU6-692P-201ENST00000384496 107 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 SNORD116-4-201ENST00000384733 96 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 RNU6-1106P-201ENST00000390845 107 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 RNU6-1068P-201ENST00000410958 103 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 ARL5AP1-201ENST00000418991 388 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 USP9YP20-201ENST00000419224 558 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.09□□□□□ -2.07
SSX3Q99909 WARS2P1-201ENST00000429678 537 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.09□□□□□ -2.07
SSX3Q99909 SNRPGP7-201ENST00000469016 106 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 RPL30P1-201ENST00000488676 339 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 Y_RNA.654-201ENST00000497848 106 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 RNA5SP282-201ENST00000516355 108 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 SNORD60.2-201ENST00000516883 86 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 AC034114.1-201ENST00000520293 285 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 AC115990.1-201ENST00000526957 301 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.09□□□□□ -2.07
SSX3Q99909 VN1R107P-201ENST00000601784 209 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 ELOCP5-201ENST00000604924 333 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 AF250324.2-201ENST00000608299 610 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 AC241585.2-209ENST00000638217 143 ntBASIC2.09□□□□□ -2.07
SSX3Q99909 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SSX3Q99909 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.09□□□□□ -2.08
SSX3Q99909 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
SSX3Q99909 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
SSX3Q99909 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SSX3Q99909 snoU2_19.1-201ENST00000362361 80 ntBASIC2.08□□□□□ -2.08
SSX3Q99909 HMGN2P39-201ENST00000398005 273 ntBASIC2.08□□□□□ -2.08
SSX3Q99909 RPS29P13-201ENST00000402041 169 ntBASIC2.08□□□□□ -2.08
SSX3Q99909 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.08□□□□□ -2.08
SSX3Q99909 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.08□□□□□ -2.08
SSX3Q99909 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.08□□□□□ -2.08
SSX3Q99909 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.08□□□□□ -2.08
SSX3Q99909 AC090255.1-201ENST00000495779 349 ntBASIC2.08□□□□□ -2.08
SSX3Q99909 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.08□□□□□ -2.08
SSX3Q99909 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.08□□□□□ -2.08
SSX3Q99909 AC010486.1-201ENST00000511793 424 ntBASIC2.08□□□□□ -2.08
SSX3Q99909 RNU6-720P-201ENST00000516363 108 ntBASIC2.08□□□□□ -2.08
SSX3Q99909 RNA5SP137-201ENST00000516833 135 ntBASIC2.08□□□□□ -2.08
SSX3Q99909 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.08□□□□□ -2.08
SSX3Q99909 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.08□□□□□ -2.08
SSX3Q99909 AK6P1-201ENST00000540219 478 ntBASIC2.08□□□□□ -2.08
SSX3Q99909 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.08□□□□□ -2.08
SSX3Q99909 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.08□□□□□ -2.08
SSX3Q99909 MIR4287-201ENST00000579398 78 ntBASIC2.08□□□□□ -2.08
SSX3Q99909 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.08□□□□□ -2.08
SSX3Q99909 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.08□□□□□ -2.08
SSX3Q99909 AC092807.2-201ENST00000609367 243 ntBASIC2.08□□□□□ -2.08
SSX3Q99909 AC068137.3-201ENST00000639191 341 ntBASIC2.08□□□□□ -2.08
SSX3Q99909 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SSX3Q99909 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SSX3Q99909 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SSX3Q99909 OR4G1P-203ENST00000641984 1631 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 RNU4-82P-201ENST00000362443 140 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 U8.8-201ENST00000365399 135 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 RNU6-1274P-201ENST00000384557 107 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 MIR181A1-201ENST00000385026 110 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 MIR29B2-201ENST00000385055 81 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 SNORD73A-201ENST00000386062 65 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 AL139413.1-201ENST00000421309 217 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 SRIP2-201ENST00000428470 166 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.07□□□□□ -2.08
SSX3Q99909 AC011816.1-201ENST00000441346 546 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 RNU6-1208P-201ENST00000459588 107 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.07□□□□□ -2.08
SSX3Q99909 HMGB1P35-201ENST00000503360 598 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.07□□□□□ -2.08
SSX3Q99909 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.07□□□□□ -2.08
SSX3Q99909 SNORA19.2-201ENST00000516013 114 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 AC087854.1-201ENST00000519706 414 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 RNU6-323P-201ENST00000521915 107 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.07□□□□□ -2.08
SSX3Q99909 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.07□□□□□ -2.08
SSX3Q99909 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.07□□□□□ -2.08
SSX3Q99909 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.07□□□□□ -2.08
SSX3Q99909 EIF1P4-201ENST00000572664 335 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 AL357078.3-201ENST00000607528 618 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 DISC2.1-201ENST00000612827 205 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 AL162373.1-201ENST00000620433 407 ntBASIC2.07□□□□□ -2.08
SSX3Q99909 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.07□□□□□ -2.08
SSX3Q99909 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.07□□□□□ -2.08
SSX3Q99909 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
SSX3Q99909 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SSX3Q99909 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SSX3Q99909 Y_RNA.3-201ENST00000362331 103 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 RNU6-1159P-201ENST00000362933 107 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 Y_RNA.231-201ENST00000364358 102 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 RNU6-43P-201ENST00000384302 107 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 MIR27B-201ENST00000385129 97 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 MIR514A2-201ENST00000385131 88 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 MIR514A3-201ENST00000385132 88 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 AL356379.1-201ENST00000414105 126 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 HMGN2P38-201ENST00000423806 265 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 AL513328.1-201ENST00000446460 224 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.06□□□□□ -2.08
SSX3Q99909 AL353752.1-201ENST00000454946 260 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms