Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SMOQ99835 AL021368.2-201ENST00000606125 5352 ntBASIC3.21□□□□□ -1.9
SMOQ99835 AC007256.1-201ENST00000392253 2765 ntBASIC3.21□□□□□ -1.9
SMOQ99835 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.21□□□□□ -1.9
SMOQ99835 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SMOQ99835 Y_RNA.39-201ENST00000362620 98 ntBASIC3.21□□□□□ -1.9
SMOQ99835 SNORD56.1-201ENST00000362913 68 ntBASIC3.21□□□□□ -1.9
SMOQ99835 SNORA71.1-201ENST00000364523 117 ntBASIC3.21□□□□□ -1.9
SMOQ99835 RNU4-42P-201ENST00000364738 142 ntBASIC3.21□□□□□ -1.9
SMOQ99835 RNU6-198P-201ENST00000384258 104 ntBASIC3.21□□□□□ -1.9
SMOQ99835 RNA5SP252-201ENST00000391131 119 ntBASIC3.21□□□□□ -1.9
SMOQ99835 RNA5SP494-201ENST00000410653 129 ntBASIC3.21□□□□□ -1.9
SMOQ99835 RPL32P35-201ENST00000415214 394 ntBASIC3.21□□□□□ -1.9
SMOQ99835 AC074117.2-201ENST00000417130 397 ntBASIC3.21□□□□□ -1.9
SMOQ99835 AC245291.1-201ENST00000419501 328 ntBASIC3.21□□□□□ -1.9
SMOQ99835 AL031659.1-201ENST00000447075 539 ntBASIC3.21□□□□□ -1.9
SMOQ99835 RN7SL20P-201ENST00000488827 297 ntBASIC3.21□□□□□ -1.9
SMOQ99835 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.21□□□□□ -1.9
SMOQ99835 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.21□□□□□ -1.9
SMOQ99835 AL117187.1-201ENST00000555482 181 ntBASIC3.21□□□□□ -1.9
SMOQ99835 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.21□□□□□ -1.9
SMOQ99835 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.21□□□□□ -1.9
SMOQ99835 AC011471.1-201ENST00000585766 187 ntBASIC3.21□□□□□ -1.9
SMOQ99835 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.21□□□□□ -1.9
SMOQ99835 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.21□□□□□ -1.9
SMOQ99835 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.21□□□□□ -1.9
SMOQ99835 AL078596.1-201ENST00000624856 447 ntBASIC3.21□□□□□ -1.9
SMOQ99835 AC138305.3-201ENST00000624988 240 ntBASIC3.21□□□□□ -1.9
SMOQ99835 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
SMOQ99835 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SMOQ99835 AC008669.1-201ENST00000565823 2178 ntBASIC3.21□□□□□ -1.9
SMOQ99835 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMOQ99835 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SMOQ99835 RNU6-450P-201ENST00000364654 107 ntBASIC3.2□□□□□ -1.9
SMOQ99835 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.2□□□□□ -1.9
SMOQ99835 BTF3L4P2-201ENST00000392798 346 ntBASIC3.2□□□□□ -1.9
SMOQ99835 MIR548F4-201ENST00000408515 105 ntBASIC3.2□□□□□ -1.9
SMOQ99835 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.2□□□□□ -1.9
SMOQ99835 MTCYBP10-201ENST00000424905 650 ntBASIC3.2□□□□□ -1.9
SMOQ99835 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.2□□□□□ -1.9
SMOQ99835 AC092423.1-201ENST00000430165 186 ntBASIC3.2□□□□□ -1.9
SMOQ99835 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.2□□□□□ -1.9
SMOQ99835 AC007969.2-201ENST00000441891 191 ntBASIC3.2□□□□□ -1.9
SMOQ99835 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SMOQ99835 AC112492.4-201ENST00000456549 352 ntBASIC3.2□□□□□ -1.9
SMOQ99835 RNU7-169P-201ENST00000459456 61 ntBASIC3.2□□□□□ -1.9
SMOQ99835 AC117440.1-201ENST00000474107 571 ntBASIC3.2□□□□□ -1.9
SMOQ99835 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.2□□□□□ -1.9
SMOQ99835 AC091874.1-201ENST00000511402 339 ntBASIC3.2□□□□□ -1.9
SMOQ99835 SNORA31.23-201ENST00000517219 133 ntBASIC3.2□□□□□ -1.9
SMOQ99835 AP002404.1-201ENST00000532005 451 ntBASIC3.2□□□□□ -1.9
SMOQ99835 AC099778.2-201ENST00000610904 211 ntBASIC3.2□□□□□ -1.9
SMOQ99835 AL138880.2-201ENST00000616214 239 ntBASIC3.2□□□□□ -1.9
SMOQ99835 AC087588.2-201ENST00000617667 426 ntBASIC3.2□□□□□ -1.9
SMOQ99835 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.2□□□□□ -1.9
SMOQ99835 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMOQ99835 AC009541.1-201ENST00000438279 2662 ntBASIC3.2□□□□□ -1.9
SMOQ99835 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMOQ99835 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMOQ99835 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.19□□□□□ -1.9
SMOQ99835 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SMOQ99835 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SMOQ99835 AC093908.1-201ENST00000623125 8092 ntBASIC3.19□□□□□ -1.9
SMOQ99835 RNU6-874P-201ENST00000362390 105 ntBASIC3.19□□□□□ -1.9
SMOQ99835 RNA5SP383-201ENST00000362934 120 ntBASIC3.19□□□□□ -1.9
SMOQ99835 Y_RNA.144-201ENST00000363521 113 ntBASIC3.19□□□□□ -1.9
SMOQ99835 Y_RNA.153-201ENST00000363615 91 ntBASIC3.19□□□□□ -1.9
SMOQ99835 RNU1-140P-201ENST00000365040 165 ntBASIC3.19□□□□□ -1.9
SMOQ99835 Y_RNA.455-201ENST00000384230 98 ntBASIC3.19□□□□□ -1.9
SMOQ99835 SNORA48.8-201ENST00000391324 134 ntBASIC3.19□□□□□ -1.9
SMOQ99835 HMGB3P2-201ENST00000411913 584 ntBASIC3.19□□□□□ -1.9
SMOQ99835 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.19□□□□□ -1.9
SMOQ99835 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.19□□□□□ -1.9
SMOQ99835 MTCO3P29-201ENST00000432119 779 ntBASIC3.19□□□□□ -1.9
SMOQ99835 AC124916.1-201ENST00000444020 547 ntBASIC3.19□□□□□ -1.9
SMOQ99835 MED28P2-201ENST00000475771 317 ntBASIC3.19□□□□□ -1.9
SMOQ99835 AC015911.1-201ENST00000495111 156 ntBASIC3.19□□□□□ -1.9
SMOQ99835 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.19□□□□□ -1.9
SMOQ99835 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.19□□□□□ -1.9
SMOQ99835 RNU6-475P-201ENST00000516073 104 ntBASIC3.19□□□□□ -1.9
SMOQ99835 ACA59.2-201ENST00000517061 156 ntBASIC3.19□□□□□ -1.9
SMOQ99835 MRPS36P4-201ENST00000534436 298 ntBASIC3.19□□□□□ -1.9
SMOQ99835 HSBP1P1-201ENST00000555205 166 ntBASIC3.19□□□□□ -1.9
SMOQ99835 AC009163.5-201ENST00000575421 637 ntBASIC3.19□□□□□ -1.9
SMOQ99835 AC113195.1-201ENST00000579952 141 ntBASIC3.19□□□□□ -1.9
SMOQ99835 MIR5188-201ENST00000583467 113 ntBASIC3.19□□□□□ -1.9
SMOQ99835 AC060766.3-201ENST00000591442 263 ntBASIC3.19□□□□□ -1.9
SMOQ99835 AP000942.4-201ENST00000604811 241 ntBASIC3.19□□□□□ -1.9
SMOQ99835 AC007318.2-201ENST00000620999 243 ntBASIC3.19□□□□□ -1.9
SMOQ99835 MIR3199-2-201ENST00000636243 86 ntBASIC3.19□□□□□ -1.9
SMOQ99835 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SMOQ99835 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMOQ99835 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMOQ99835 Y_RNA.389-201ENST00000383924 113 ntBASIC3.18□□□□□ -1.9
SMOQ99835 RNU6-26P-201ENST00000383985 107 ntBASIC3.18□□□□□ -1.9
SMOQ99835 SNORA44-201ENST00000384584 132 ntBASIC3.18□□□□□ -1.9
SMOQ99835 Y_RNA.557-201ENST00000384680 107 ntBASIC3.18□□□□□ -1.9
SMOQ99835 MIR568-201ENST00000385036 95 ntBASIC3.18□□□□□ -1.9
SMOQ99835 MIR625-201ENST00000385047 85 ntBASIC3.18□□□□□ -1.9
SMOQ99835 RNU6-700P-201ENST00000391043 107 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 202.8 ms