Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AC091144.1-201ENST00000519573 138 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TIMP4Q99727 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.08□□□□□ -1.92
TIMP4Q99727 MRPS36P4-201ENST00000534436 298 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 AC007375.1-201ENST00000554513 578 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 LINC00933-203ENST00000559812 219 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 H3F3AP1-201ENST00000559984 334 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 MIR5195-201ENST00000583555 115 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 AC012433.1-201ENST00000588916 398 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.08□□□□□ -1.92
TIMP4Q99727 SDR42E1P4-201ENST00000620894 481 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 AC027309.3-201ENST00000623419 351 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 SCARNA4-202ENST00000625402 129 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.08□□□□□ -1.92
TIMP4Q99727 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TIMP4Q99727 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TIMP4Q99727 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.07□□□□□ -1.92
TIMP4Q99727 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.07□□□□□ -1.92
TIMP4Q99727 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.07□□□□□ -1.92
TIMP4Q99727 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TIMP4Q99727 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
TIMP4Q99727 Y_RNA.27-201ENST00000362540 103 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 RNU6-212P-201ENST00000362642 104 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 MIR215-201ENST00000384858 110 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 RPL21P75-201ENST00000396599 483 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TIMP4Q99727 RPL21P28-201ENST00000401418 483 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 U3.37-201ENST00000408528 213 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 RNA5SP129-201ENST00000410276 118 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.07□□□□□ -1.92
TIMP4Q99727 AL590556.1-201ENST00000423231 483 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TIMP4Q99727 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.07□□□□□ -1.92
TIMP4Q99727 RPL21P39-201ENST00000463605 483 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.07□□□□□ -1.92
TIMP4Q99727 AC087190.1-201ENST00000484462 480 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 AC107032.1-201ENST00000485945 480 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 AC132942.1-201ENST00000486753 483 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 AC093591.1-201ENST00000491435 481 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 RPL21P16-201ENST00000495531 483 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 RNU6-1023P-201ENST00000516137 106 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 CASP1P1-201ENST00000526345 212 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.07□□□□□ -1.92
TIMP4Q99727 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.07□□□□□ -1.92
TIMP4Q99727 AC104581.2-201ENST00000572227 430 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.07□□□□□ -1.92
TIMP4Q99727 RPL23AP78-201ENST00000599928 470 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 FTX_3.1-201ENST00000610451 147 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 AC141273.2-201ENST00000618989 130 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 AC092628.2-201ENST00000622492 339 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 AC241585.2-209ENST00000638217 143 ntBASIC3.07□□□□□ -1.92
TIMP4Q99727 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
TIMP4Q99727 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
TIMP4Q99727 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
TIMP4Q99727 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
TIMP4Q99727 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.07□□□□□ -1.92
TIMP4Q99727 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TIMP4Q99727 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TIMP4Q99727 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TIMP4Q99727 AL356274.2-201ENST00000624379 3752 ntBASIC3.06□□□□□ -1.92
TIMP4Q99727 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TIMP4Q99727 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TIMP4Q99727 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TIMP4Q99727 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TIMP4Q99727 RNU6-105P-201ENST00000363909 104 ntBASIC3.06□□□□□ -1.92
TIMP4Q99727 Z98749.2-208ENST00000381646 500 ntBASIC3.06□□□□□ -1.92
TIMP4Q99727 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.06□□□□□ -1.92
TIMP4Q99727 Y_RNA.515-201ENST00000384535 112 ntBASIC3.06□□□□□ -1.92
TIMP4Q99727 MIR491-201ENST00000384877 84 ntBASIC3.06□□□□□ -1.92
TIMP4Q99727 MIR591-201ENST00000385290 95 ntBASIC3.06□□□□□ -1.92
TIMP4Q99727 RNU2-25P-201ENST00000411041 191 ntBASIC3.06□□□□□ -1.92
TIMP4Q99727 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.06□□□□□ -1.92
TIMP4Q99727 RPL23AP82-202ENST00000427528 469 ntBASIC3.06□□□□□ -1.92
TIMP4Q99727 AL672296.1-201ENST00000427780 2158 ntBASIC3.06□□□□□ -1.92
TIMP4Q99727 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.06□□□□□ -1.92
TIMP4Q99727 RPL21P40-201ENST00000428586 483 ntBASIC3.06□□□□□ -1.92
TIMP4Q99727 AC124916.1-201ENST00000444020 547 ntBASIC3.06□□□□□ -1.92
TIMP4Q99727 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.06□□□□□ -1.92
TIMP4Q99727 CENPBD1P1-201ENST00000464061 469 ntBASIC3.06□□□□□ -1.92
TIMP4Q99727 AC010265.1-201ENST00000513509 211 ntBASIC3.06□□□□□ -1.92
TIMP4Q99727 SNORA43.2-201ENST00000516652 128 ntBASIC3.06□□□□□ -1.92
TIMP4Q99727 SCARNA20.6-201ENST00000517251 106 ntBASIC3.06□□□□□ -1.92
TIMP4Q99727 AL442163.3-201ENST00000554110 156 ntBASIC3.06□□□□□ -1.92
TIMP4Q99727 AC060766.3-201ENST00000591442 263 ntBASIC3.06□□□□□ -1.92
TIMP4Q99727 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.06□□□□□ -1.92
TIMP4Q99727 AC233981.2-201ENST00000611524 1614 ntBASIC3.06□□□□□ -1.92
TIMP4Q99727 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TIMP4Q99727 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.05□□□□□ -1.92
TIMP4Q99727 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TIMP4Q99727 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
TIMP4Q99727 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.05□□□□□ -1.92
TIMP4Q99727 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TIMP4Q99727 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
TIMP4Q99727 RNU6-50P-201ENST00000362356 103 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 SNORD27-201ENST00000363981 72 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 RNU6-805P-201ENST00000365643 106 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 Y_RNA.439-201ENST00000384119 94 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 Y_RNA.562-201ENST00000384695 113 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 U3.19-201ENST00000390893 196 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms