Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RN7SKP19-201ENST00000516016 252 ntBASIC-0.52□□□□□ -2.49
CFAP54Q96N23 MIR5094-201ENST00000578766 85 ntBASIC-0.52□□□□□ -2.49
CFAP54Q96N23 RNU4-23P-201ENST00000362839 140 ntBASIC-0.53□□□□□ -2.49
CFAP54Q96N23 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC-0.53□□□□□ -2.49
CFAP54Q96N23 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC-0.53□□□□□ -2.49
CFAP54Q96N23 AC009237.15-201ENST00000610252 501 ntBASIC-0.53□□□□□ -2.49
CFAP54Q96N23 AC019226.1-201ENST00000625666 515 ntBASIC-0.53□□□□□ -2.49
CFAP54Q96N23 RNU6-24P-201ENST00000384440 107 ntBASIC-0.53□□□□□ -2.49
CFAP54Q96N23 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
CFAP54Q96N23 MIR1283-2-201ENST00000408621 87 ntBASIC-0.53□□□□□ -2.49
CFAP54Q96N23 AC078974.1-201ENST00000411597 223 ntBASIC-0.53□□□□□ -2.49
CFAP54Q96N23 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.53□□□□□ -2.49
CFAP54Q96N23 CYB5AP5-201ENST00000549779 389 ntBASIC-0.53□□□□□ -2.49
CFAP54Q96N23 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC-0.53□□□□□ -2.5
CFAP54Q96N23 RNU7-90P-201ENST00000459216 62 ntBASIC-0.53□□□□□ -2.5
CFAP54Q96N23 AP002004.2-201ENST00000531656 154 ntBASIC-0.53□□□□□ -2.5
CFAP54Q96N23 AL357094.1-201ENST00000603845 844 ntBASIC-0.53□□□□□ -2.5
CFAP54Q96N23 AC092268.1-201ENST00000342691 405 ntBASIC-0.54□□□□□ -2.5
CFAP54Q96N23 RNU5E-1-201ENST00000362477 120 ntBASIC-0.54□□□□□ -2.5
CFAP54Q96N23 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC-0.54□□□□□ -2.5
CFAP54Q96N23 AC233266.1-201ENST00000454518 96 ntBASIC-0.54□□□□□ -2.5
CFAP54Q96N23 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.54□□□□□ -2.5
CFAP54Q96N23 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC-0.54□□□□□ -2.5
CFAP54Q96N23 RNU6-165P-201ENST00000517170 99 ntBASIC-0.54□□□□□ -2.5
CFAP54Q96N23 ELOCP32-201ENST00000548625 324 ntBASIC-0.54□□□□□ -2.5
CFAP54Q96N23 AC242852.1-201ENST00000612151 96 ntBASIC-0.54□□□□□ -2.5
CFAP54Q96N23 AL359314.1-201ENST00000616913 261 ntBASIC-0.54□□□□□ -2.5
CFAP54Q96N23 FAS-AS1.2-201ENST00000620386 170 ntBASIC-0.54□□□□□ -2.5
CFAP54Q96N23 AC244015.1-201ENST00000622301 99 ntBASIC-0.54□□□□□ -2.5
CFAP54Q96N23 ENSAP3-201ENST00000312710 333 ntBASIC-0.54□□□□□ -2.5
CFAP54Q96N23 RNU6-284P-201ENST00000411105 106 ntBASIC-0.54□□□□□ -2.5
CFAP54Q96N23 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC-0.54□□□□□ -2.5
CFAP54Q96N23 AL160275.3-201ENST00000423876 471 ntBASIC-0.54□□□□□ -2.5
CFAP54Q96N23 AC114755.3-201ENST00000481111 251 ntBASIC-0.54□□□□□ -2.5
CFAP54Q96N23 AC025627.3-201ENST00000582078 182 ntBASIC-0.54□□□□□ -2.5
CFAP54Q96N23 AC011921.3-201ENST00000605540 361 ntBASIC-0.54□□□□□ -2.5
CFAP54Q96N23 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.54□□□□□ -2.5
CFAP54Q96N23 RNU6-793P-201ENST00000384233 104 ntBASIC-0.55□□□□□ -2.5
CFAP54Q96N23 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
CFAP54Q96N23 RPS15AP40-201ENST00000419621 391 ntBASIC-0.55□□□□□ -2.5
CFAP54Q96N23 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.55□□□□□ -2.5
CFAP54Q96N23 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.55□□□□□ -2.5
CFAP54Q96N23 MTCO3P10-201ENST00000455912 772 ntBASIC-0.55□□□□□ -2.5
CFAP54Q96N23 HMGN1P13-201ENST00000505795 138 ntBASIC-0.55□□□□□ -2.5
CFAP54Q96N23 RN7SKP258-201ENST00000517151 304 ntBASIC-0.55□□□□□ -2.5
CFAP54Q96N23 MIR4432-201ENST00000581823 84 ntBASIC-0.55□□□□□ -2.5
CFAP54Q96N23 MTND4LP21-201ENST00000415303 295 ntBASIC-0.55□□□□□ -2.5
CFAP54Q96N23 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.55□□□□□ -2.5
CFAP54Q96N23 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.55□□□□□ -2.5
CFAP54Q96N23 MTCO3P5-201ENST00000433620 714 ntBASIC-0.55□□□□□ -2.5
CFAP54Q96N23 AL031313.1-201ENST00000448435 256 ntBASIC-0.55□□□□□ -2.5
CFAP54Q96N23 AP003716.2-201ENST00000528260 108 ntBASIC-0.55□□□□□ -2.5
CFAP54Q96N23 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.55□□□□□ -2.5
CFAP54Q96N23 AC002400.1-201ENST00000569310 726 ntBASIC-0.55□□□□□ -2.5
CFAP54Q96N23 AL355802.4-201ENST00000607635 548 ntBASIC-0.55□□□□□ -2.5
CFAP54Q96N23 Z82243.1-201ENST00000609432 473 ntBASIC-0.55□□□□□ -2.5
CFAP54Q96N23 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.55□□□□□ -2.5
CFAP54Q96N23 MIR7844-201ENST00000616161 122 ntBASIC-0.55□□□□□ -2.5
CFAP54Q96N23 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.55□□□□□ -2.5
CFAP54Q96N23 RNU6-969P-201ENST00000383900 105 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 FABP5P4-201ENST00000437203 171 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 RPL7P55-201ENST00000450522 746 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 RNU7-56P-201ENST00000458744 62 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 RPS26P48-201ENST00000491713 339 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 MIR5697-201ENST00000578045 78 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 MIR4436A-201ENST00000585278 85 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 AL391001.1-201ENST00000602747 715 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 AL031176.1-201ENST00000604554 466 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 AL365434.2-201ENST00000607979 234 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 RNU2-49P-201ENST00000410666 184 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 RPS15AP38-201ENST00000413110 372 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.56□□□□□ -2.5
CFAP54Q96N23 MTCO2P25-201ENST00000447065 681 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC-0.56□□□□□ -2.5
CFAP54Q96N23 HMGB1P30-201ENST00000492455 606 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 AC022861.1-201ENST00000522981 663 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 AL512310.8-201ENST00000550183 120 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 MED28P6-201ENST00000558776 231 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 MIR4743-201ENST00000584576 69 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 BNIP3P27-201ENST00000599991 412 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 RNU6-747P-201ENST00000390928 104 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 RNU6-241P-201ENST00000391148 104 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.56□□□□□ -2.5
CFAP54Q96N23 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC-0.56□□□□□ -2.5
CFAP54Q96N23 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 BBIP1P1-201ENST00000602999 279 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 AC022960.3-201ENST00000619794 441 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 AL078595.3-201ENST00000623815 1166 ntBASIC-0.56□□□□□ -2.5
CFAP54Q96N23 SNORD114-11-201ENST00000363738 75 ntBASIC-0.57□□□□□ -2.5
CFAP54Q96N23 SNX2P2-201ENST00000424553 323 ntBASIC-0.57□□□□□ -2.5
CFAP54Q96N23 BRK1P2-201ENST00000442875 223 ntBASIC-0.57□□□□□ -2.5
CFAP54Q96N23 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.57□□□□□ -2.5
CFAP54Q96N23 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC-0.57□□□□□ -2.5
CFAP54Q96N23 AC007151.1-201ENST00000572774 483 ntBASIC-0.57□□□□□ -2.5
CFAP54Q96N23 MIR3664-201ENST00000579074 99 ntBASIC-0.57□□□□□ -2.5
CFAP54Q96N23 AL589743.7-201ENST00000612637 233 ntBASIC-0.57□□□□□ -2.5
CFAP54Q96N23 AC009233.1-201ENST00000616477 371 ntBASIC-0.57□□□□□ -2.5
CFAP54Q96N23 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms