Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AL096829.2-201ENST00000446582 742 ntBASIC0.67□□□□□ -2.3
ALPK3Q96L96 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
ALPK3Q96L96 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.67□□□□□ -2.3
ALPK3Q96L96 snoU13.14-201ENST00000459372 104 ntBASIC0.67□□□□□ -2.3
ALPK3Q96L96 MTND1P3-201ENST00000484956 952 ntBASIC0.67□□□□□ -2.3
ALPK3Q96L96 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.67□□□□□ -2.3
ALPK3Q96L96 AC025465.3-201ENST00000510570 311 ntBASIC0.67□□□□□ -2.3
ALPK3Q96L96 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.67□□□□□ -2.3
ALPK3Q96L96 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.67□□□□□ -2.3
ALPK3Q96L96 AP003122.4-201ENST00000530980 758 ntBASIC0.67□□□□□ -2.3
ALPK3Q96L96 AC018630.3-201ENST00000542637 96 ntBASIC0.67□□□□□ -2.3
ALPK3Q96L96 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
ALPK3Q96L96 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.67□□□□□ -2.3
ALPK3Q96L96 MIR3937-201ENST00000580135 106 ntBASIC0.67□□□□□ -2.3
ALPK3Q96L96 AC073544.2-201ENST00000601155 540 ntBASIC0.67□□□□□ -2.3
ALPK3Q96L96 MIR6759-201ENST00000638110 65 ntBASIC0.67□□□□□ -2.3
ALPK3Q96L96 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
ALPK3Q96L96 RNA5SP63-201ENST00000391225 112 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 MTND1P16-201ENST00000465177 898 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 RPL30P1-201ENST00000488676 339 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.66□□□□□ -2.3
ALPK3Q96L96 HMGN1P13-201ENST00000505795 138 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 SNORD116-28-201ENST00000516123 91 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.66□□□□□ -2.3
ALPK3Q96L96 AP000763.2-201ENST00000540641 163 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 AC136932.1-201ENST00000574771 208 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 BNIP3P26-201ENST00000600827 554 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 AC021171.1-201ENST00000603137 706 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 Z82243.1-201ENST00000609432 473 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.66□□□□□ -2.3
ALPK3Q96L96 AC099654.5-201ENST00000636479 350 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
ALPK3Q96L96 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.66□□□□□ -2.3
ALPK3Q96L96 SMIM11P1-201ENST00000369586 178 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 RNU6-1025P-201ENST00000410629 104 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.66□□□□□ -2.3
ALPK3Q96L96 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.66□□□□□ -2.3
ALPK3Q96L96 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
ALPK3Q96L96 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.66□□□□□ -2.3
ALPK3Q96L96 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.66□□□□□ -2.3
ALPK3Q96L96 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.66□□□□□ -2.3
ALPK3Q96L96 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.66□□□□□ -2.3
ALPK3Q96L96 AP003392.2-201ENST00000527269 208 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.66□□□□□ -2.3
ALPK3Q96L96 MIR4661-201ENST00000582720 75 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.66□□□□□ -2.3
ALPK3Q96L96 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.66□□□□□ -2.3
ALPK3Q96L96 BNIP3P27-201ENST00000599991 412 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 MIR15A-201ENST00000607334 83 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 AC084824.5-201ENST00000612009 413 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 U6.42-201ENST00000618440 107 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 AL158163.2-201ENST00000619110 700 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 AL136313.1-201ENST00000624804 202 ntBASIC0.66□□□□□ -2.3
ALPK3Q96L96 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.65□□□□□ -2.3
ALPK3Q96L96 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
ALPK3Q96L96 AC245060.5-201ENST00000610778 3293 ntBASIC0.65□□□□□ -2.31
ALPK3Q96L96 Y_RNA.60-201ENST00000362831 98 ntBASIC0.65□□□□□ -2.31
ALPK3Q96L96 Y_RNA.280-201ENST00000364765 112 ntBASIC0.65□□□□□ -2.31
ALPK3Q96L96 AL606517.1-201ENST00000446914 387 ntBASIC0.65□□□□□ -2.31
ALPK3Q96L96 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
ALPK3Q96L96 AC087477.1-201ENST00000465747 340 ntBASIC0.65□□□□□ -2.31
ALPK3Q96L96 MTND1P36-201ENST00000522384 936 ntBASIC0.65□□□□□ -2.31
ALPK3Q96L96 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.65□□□□□ -2.31
ALPK3Q96L96 BNIP3P30-201ENST00000601184 574 ntBASIC0.65□□□□□ -2.31
ALPK3Q96L96 AL022154.1-201ENST00000604698 785 ntBASIC0.65□□□□□ -2.31
ALPK3Q96L96 RNU6-222P-201ENST00000362438 107 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 RNU6-438P-201ENST00000365561 103 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 AL365338.1-201ENST00000422282 858 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 MTCO1P27-201ENST00000448269 226 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 AC132479.1-201ENST00000449160 144 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 RPS26P55-201ENST00000471178 356 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
ALPK3Q96L96 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.64□□□□□ -2.31
ALPK3Q96L96 MIR3169-201ENST00000578032 83 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 AP002802.2-201ENST00000605877 235 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 AC091948.2-201ENST00000636510 279 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 MIR3529-201ENST00000637713 78 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 AC100821.1-201ENST00000523153 2479 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 Y_RNA.623-201ENST00000411128 95 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.64□□□□□ -2.31
ALPK3Q96L96 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.64□□□□□ -2.31
ALPK3Q96L96 PGBD4P5-201ENST00000445958 426 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 HMGN2P9-201ENST00000476875 229 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
ALPK3Q96L96 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.64□□□□□ -2.31
ALPK3Q96L96 AC019288.1-201ENST00000557918 224 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.64□□□□□ -2.31
ALPK3Q96L96 MZT1P2-201ENST00000604387 248 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 AL355816.2-201ENST00000610049 647 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 AC130324.3-201ENST00000614165 542 ntBASIC0.64□□□□□ -2.31
ALPK3Q96L96 Y_RNA.99-201ENST00000363138 105 ntBASIC0.63□□□□□ -2.31
ALPK3Q96L96 RNU6-1164P-201ENST00000364428 107 ntBASIC0.63□□□□□ -2.31
ALPK3Q96L96 RNU5E-6P-201ENST00000365574 115 ntBASIC0.63□□□□□ -2.31
ALPK3Q96L96 RNU6-26P-201ENST00000383985 107 ntBASIC0.63□□□□□ -2.31
ALPK3Q96L96 Y_RNA.471-201ENST00000384312 102 ntBASIC0.63□□□□□ -2.31
ALPK3Q96L96 PIGFP2-201ENST00000421400 651 ntBASIC0.63□□□□□ -2.31
ALPK3Q96L96 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.63□□□□□ -2.31
ALPK3Q96L96 UBE2V1P8-201ENST00000437166 265 ntBASIC0.63□□□□□ -2.31
ALPK3Q96L96 DYNLT3P2-201ENST00000442517 295 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms