Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RNU1-70P-201ENST00000362618 164 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 RNU6-596P-201ENST00000365395 98 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 AL357075.1-201ENST00000404107 726 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS50Q96JG6 AC074117.2-201ENST00000417130 397 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.04□□□□□ -1.92
VPS50Q96JG6 AL353997.1-201ENST00000432936 108 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 RPL23AP50-201ENST00000434149 455 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS50Q96JG6 AL031659.1-201ENST00000447075 539 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 RN7SL863P-201ENST00000462370 296 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 MED28P2-201ENST00000475771 317 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 AC022447.4-201ENST00000504053 364 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 AC022493.2-201ENST00000506122 481 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS50Q96JG6 Y_RNA.711-201ENST00000516993 102 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 RNU6-699P-201ENST00000517081 110 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 SNORA31.23-201ENST00000517219 133 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.04□□□□□ -1.92
VPS50Q96JG6 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS50Q96JG6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS50Q96JG6 AC010186.2-204ENST00000537668 439 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 CR383656.8-201ENST00000549046 145 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.04□□□□□ -1.92
VPS50Q96JG6 SNRPGP18-201ENST00000553000 214 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.04□□□□□ -1.92
VPS50Q96JG6 MIR4273-201ENST00000582824 84 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS50Q96JG6 AC010620.2-201ENST00000600135 313 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 AC018889.1-201ENST00000605372 397 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 Y_RNA.812-201ENST00000610788 101 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 Y_RNA.784-201ENST00000613803 101 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 Y_RNA.787-201ENST00000616522 101 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 Y_RNA.780-201ENST00000617336 101 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 Y_RNA.801-201ENST00000619005 101 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 MIR6733-201ENST00000635723 61 ntBASIC3.04□□□□□ -1.92
VPS50Q96JG6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.04□□□□□ -1.92
VPS50Q96JG6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.04□□□□□ -1.92
VPS50Q96JG6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VPS50Q96JG6 SNORD50.1-201ENST00000362987 71 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 RNU1-105P-201ENST00000363470 161 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 RNU1-140P-201ENST00000365040 165 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 AL133475.1-201ENST00000404414 305 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS50Q96JG6 AL365496.1-201ENST00000426885 215 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 AL591043.1-201ENST00000432461 424 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.03□□□□□ -1.92
VPS50Q96JG6 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS50Q96JG6 UBBP3-201ENST00000445497 241 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 NIPA2P5-201ENST00000452282 464 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 AL163540.1-201ENST00000485382 386 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 AP001025.1-201ENST00000486139 332 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS50Q96JG6 AC091874.1-201ENST00000511402 339 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 SMURF2P1-201ENST00000514992 481 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 AC022634.1-201ENST00000520765 532 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS50Q96JG6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS50Q96JG6 AC008739.2-201ENST00000597006 317 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 AC078795.3-201ENST00000602913 472 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 CYP2C61P-201ENST00000604072 290 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 AC091152.3-201ENST00000604227 325 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 AP001836.1-201ENST00000604675 523 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 AC005014.2-201ENST00000607795 599 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 AL359198.2-201ENST00000611836 194 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 HMGB1P24-202ENST00000615653 685 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 MIR622-201ENST00000638396 96 ntBASIC3.03□□□□□ -1.92
VPS50Q96JG6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VPS50Q96JG6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS50Q96JG6 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VPS50Q96JG6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
VPS50Q96JG6 MTND4P27-201ENST00000450813 1354 ntBASIC3.02□□□□□ -1.93
VPS50Q96JG6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
VPS50Q96JG6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VPS50Q96JG6 MIR422A-201ENST00000362286 90 ntBASIC3.02□□□□□ -1.93
VPS50Q96JG6 RNU6-227P-201ENST00000362865 103 ntBASIC3.02□□□□□ -1.93
VPS50Q96JG6 SNORD56.5-201ENST00000364281 72 ntBASIC3.02□□□□□ -1.93
VPS50Q96JG6 SNORA22B-201ENST00000383876 138 ntBASIC3.02□□□□□ -1.93
VPS50Q96JG6 Y_RNA.496-201ENST00000384444 101 ntBASIC3.02□□□□□ -1.93
VPS50Q96JG6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
VPS50Q96JG6 SNORA48.5-201ENST00000391143 135 ntBASIC3.02□□□□□ -1.93
VPS50Q96JG6 AL590004.1-201ENST00000405321 300 ntBASIC3.02□□□□□ -1.93
VPS50Q96JG6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS50Q96JG6 AC007969.2-201ENST00000441891 191 ntBASIC3.02□□□□□ -1.93
VPS50Q96JG6 AC006026.2-201ENST00000457376 180 ntBASIC3.02□□□□□ -1.93
VPS50Q96JG6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS50Q96JG6 AC090096.1-201ENST00000489168 390 ntBASIC3.02□□□□□ -1.93
VPS50Q96JG6 RN7SL504P-201ENST00000494496 287 ntBASIC3.02□□□□□ -1.93
VPS50Q96JG6 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS50Q96JG6 AL442663.2-201ENST00000554385 511 ntBASIC3.02□□□□□ -1.93
VPS50Q96JG6 AC009163.5-201ENST00000575421 637 ntBASIC3.02□□□□□ -1.93
VPS50Q96JG6 AC040896.1-201ENST00000613819 479 ntBASIC3.02□□□□□ -1.93
VPS50Q96JG6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS50Q96JG6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS50Q96JG6 Y_RNA.112-201ENST00000363250 102 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 Y_RNA.123-201ENST00000363338 102 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 RNA5SP354-201ENST00000391247 136 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 RPL21P75-201ENST00000396599 483 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms