Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RPS3AP12-201ENST00000443616 753 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 AL441985.1-201ENST00000457727 251 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 RPS29P27-201ENST00000463711 170 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 FO393415.2-201ENST00000480085 343 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 RPL23AP70-201ENST00000483361 460 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 SMURF2P1-201ENST00000514992 481 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 SCGB1D5P-201ENST00000515134 247 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 AL391813.1-201ENST00000603098 260 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 AC090971.5-201ENST00000621102 293 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 AC008264.2-201ENST00000610193 3731 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 HAUS6P2-201ENST00000433254 2404 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 AL035425.3-201ENST00000564206 4996 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 MTND5P19-201ENST00000424872 1794 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 RNA5SP387-201ENST00000364226 106 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 SNORA51.4-201ENST00000364993 124 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 RNU6-596P-201ENST00000365395 98 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 RNU6-890P-201ENST00000384121 107 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 MIR544A-201ENST00000384855 91 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 BTF3L4P2-201ENST00000392798 346 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 RNU6-174P-201ENST00000410406 106 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 RPL23AP50-201ENST00000434149 455 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 AC004383.1-201ENST00000438135 289 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 AP001025.1-201ENST00000486139 332 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 AC097462.2-201ENST00000504623 481 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 SCARNA17.1-201ENST00000516211 143 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 SCARNA17.2-201ENST00000516334 143 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 SCARNA16.2-201ENST00000516520 172 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 AC103810.1-201ENST00000579873 453 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 AC078795.3-201ENST00000602913 472 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 SCARNA17.4-201ENST00000614296 143 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 MIR7515-201ENST00000637837 67 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 MTND5P10-201ENST00000603719 1809 ntBASIC3.28□□□□□ -1.88
CDK5RAP3Q96JB5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 Y_RNA.48-201ENST00000362710 103 ntBASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 Y_RNA.333-201ENST00000365274 102 ntBASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 SNORA70.4-201ENST00000365509 134 ntBASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 MIR627-201ENST00000384979 97 ntBASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 RNA5SP492-201ENST00000411330 114 ntBASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 AP000275.1-201ENST00000411943 390 ntBASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 BX276092.3-201ENST00000424182 230 ntBASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 AC244505.4-201ENST00000434905 287 ntBASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 SSXP5-201ENST00000443473 287 ntBASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 SNRPGP7-201ENST00000469016 106 ntBASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 AP004217.1-201ENST00000480579 346 ntBASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 AC083906.5-201ENST00000503722 328 ntBASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 AC022080.3-201ENST00000544433 482 ntBASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 MIR4325-201ENST00000583049 90 ntBASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 RPL23AP88-201ENST00000605759 454 ntBASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CDK5RAP3Q96JB5 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 MIR369-201ENST00000362155 70 ntBASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 Y_RNA.123-201ENST00000363338 102 ntBASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 SNORA68.1-201ENST00000364537 132 ntBASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 RNU6-851P-201ENST00000384565 107 ntBASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 SNORA75.6-201ENST00000391318 127 ntBASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 AL512633.1-201ENST00000399931 655 ntBASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 AL591034.2-201ENST00000402839 359 ntBASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 AL354751.2-201ENST00000415471 210 ntBASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 RPS15AP7-201ENST00000439294 405 ntBASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 OSTCP8-201ENST00000445117 448 ntBASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 AL031659.1-201ENST00000447075 539 ntBASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms