Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RNU6-430P-201ENST00000517078 107 ntBASIC2.11□□□□□ -2.07
VMP1Q96GC9 SNORA25.17-201ENST00000517184 124 ntBASIC2.11□□□□□ -2.07
VMP1Q96GC9 MTCO2P4-201ENST00000517968 247 ntBASIC2.11□□□□□ -2.07
VMP1Q96GC9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.11□□□□□ -2.07
VMP1Q96GC9 AC005858.4-201ENST00000623191 700 ntBASIC2.11□□□□□ -2.07
VMP1Q96GC9 ZNF680P1-201ENST00000436625 1469 ntBASIC2.11□□□□□ -2.07
VMP1Q96GC9 MTND4P1-201ENST00000457501 1466 ntBASIC2.11□□□□□ -2.07
VMP1Q96GC9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
VMP1Q96GC9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VMP1Q96GC9 SNORD32B-201ENST00000364460 84 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 RNU4-56P-201ENST00000364700 142 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 RPS29P13-201ENST00000402041 169 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 RNA5SP501-201ENST00000410990 112 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 POLHP1-201ENST00000411806 470 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 MTATP6P18-201ENST00000417994 673 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.1□□□□□ -2.07
VMP1Q96GC9 Z98742.3-201ENST00000418637 326 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.1□□□□□ -2.07
VMP1Q96GC9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.1□□□□□ -2.07
VMP1Q96GC9 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.1□□□□□ -2.07
VMP1Q96GC9 AL031274.1-201ENST00000450334 232 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 RPS27AP8-201ENST00000452665 445 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 AL356010.1-201ENST00000456364 102 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
VMP1Q96GC9 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.1□□□□□ -2.07
VMP1Q96GC9 AC069113.1-201ENST00000517763 267 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 COPS8P3-201ENST00000526024 482 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 AL356057.1-201ENST00000533798 831 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 SNRPGP18-201ENST00000553000 214 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 MTCO3P23-201ENST00000561363 289 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 MIR4713-201ENST00000582691 75 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 AC121247.2-201ENST00000604776 136 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 AL356157.2-201ENST00000605122 111 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VMP1Q96GC9 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
VMP1Q96GC9 MIR6873-201ENST00000622788 63 ntBASIC2.1□□□□□ -2.07
VMP1Q96GC9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.1□□□□□ -2.07
VMP1Q96GC9 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.1□□□□□ -2.07
VMP1Q96GC9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
VMP1Q96GC9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VMP1Q96GC9 AC233981.2-201ENST00000611524 1614 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
VMP1Q96GC9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.09□□□□□ -2.07
VMP1Q96GC9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
VMP1Q96GC9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
VMP1Q96GC9 AL591416.1-201ENST00000404015 867 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.09□□□□□ -2.07
VMP1Q96GC9 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.09□□□□□ -2.07
VMP1Q96GC9 AL590135.1-201ENST00000422215 156 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 RPL31P63-201ENST00000422565 375 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 AC019205.3-201ENST00000424573 156 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.09□□□□□ -2.07
VMP1Q96GC9 AC078809.1-201ENST00000427601 140 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 MTND4P32-201ENST00000437189 1237 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 AC018634.1-201ENST00000437554 401 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.09□□□□□ -2.07
VMP1Q96GC9 AC016700.2-201ENST00000446011 156 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 AL353705.4-201ENST00000449661 238 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.09□□□□□ -2.07
VMP1Q96GC9 RNU6-717P-201ENST00000459076 104 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 RN7SL429P-201ENST00000479090 223 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 RN7SL489P-201ENST00000486185 223 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 RN7SL327P-201ENST00000488659 223 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 AC015911.1-201ENST00000495111 156 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 AK3P2-201ENST00000507976 429 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 RN7SKP219-201ENST00000516825 296 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 AL137161.1-201ENST00000532231 390 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 AC022880.1-201ENST00000534017 973 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.09□□□□□ -2.07
VMP1Q96GC9 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.09□□□□□ -2.07
VMP1Q96GC9 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.09□□□□□ -2.07
VMP1Q96GC9 AC026464.5-201ENST00000562497 722 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 AL158211.1-201ENST00000566763 763 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 MIR1273D-201ENST00000577266 86 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 AC087752.4-201ENST00000605911 462 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 AC025754.2-201ENST00000606491 432 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 RN7SL853P-201ENST00000617250 223 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 MIR6132-201ENST00000622083 109 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 AC130454.1-201ENST00000622948 401 ntBASIC2.09□□□□□ -2.07
VMP1Q96GC9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
VMP1Q96GC9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
VMP1Q96GC9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
VMP1Q96GC9 RNU6-266P-201ENST00000364225 107 ntBASIC2.08□□□□□ -2.08
VMP1Q96GC9 Y_RNA.399-201ENST00000383955 105 ntBASIC2.08□□□□□ -2.08
VMP1Q96GC9 RNU6-26P-201ENST00000383985 107 ntBASIC2.08□□□□□ -2.08
VMP1Q96GC9 SNORA70B-201ENST00000384210 135 ntBASIC2.08□□□□□ -2.08
VMP1Q96GC9 RNU6-160P-201ENST00000384591 107 ntBASIC2.08□□□□□ -2.08
VMP1Q96GC9 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
VMP1Q96GC9 SNORA12-201ENST00000391162 147 ntBASIC2.08□□□□□ -2.08
VMP1Q96GC9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.08□□□□□ -2.08
VMP1Q96GC9 RNA5SP338-201ENST00000410495 85 ntBASIC2.08□□□□□ -2.08
VMP1Q96GC9 AL117339.3-201ENST00000418733 162 ntBASIC2.08□□□□□ -2.08
VMP1Q96GC9 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.08□□□□□ -2.08
VMP1Q96GC9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.08□□□□□ -2.08
VMP1Q96GC9 ARL2BPP4-201ENST00000506854 471 ntBASIC2.08□□□□□ -2.08
VMP1Q96GC9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.08□□□□□ -2.08
VMP1Q96GC9 AC010493.1-201ENST00000513479 292 ntBASIC2.08□□□□□ -2.08
VMP1Q96GC9 MIR449C-201ENST00000516047 92 ntBASIC2.08□□□□□ -2.08
VMP1Q96GC9 HSPE1P18-201ENST00000517602 280 ntBASIC2.08□□□□□ -2.08
VMP1Q96GC9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms