Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 Y_RNA.367-201ENST00000365544 101 ntBASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 RNU4-62P-201ENST00000410125 130 ntBASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 RPS3AP3-201ENST00000411933 242 ntBASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 AC009961.2-201ENST00000435771 251 ntBASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 SNRPFP4-201ENST00000456366 242 ntBASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 RNU6-333P-201ENST00000459117 107 ntBASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 AC027575.1-201ENST00000481064 460 ntBASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 MTND1P22-201ENST00000510572 951 ntBASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 AC104136.1-201ENST00000512969 394 ntBASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 Vault.3-201ENST00000516676 95 ntBASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 SNORA31.24-201ENST00000517232 57 ntBASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 AC106038.2-201ENST00000520706 568 ntBASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 AC137800.2-201ENST00000574375 120 ntBASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 AC079248.2-201ENST00000623779 326 ntBASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.5□□□□□ -2.17
ECHDC3Q96DC8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 RNU5F-7P-201ENST00000363696 115 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 RNU6-105P-201ENST00000363909 104 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 SNORD32B-201ENST00000364460 84 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 RNU6-74P-201ENST00000384235 107 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 RNU6-45P-201ENST00000384471 107 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 SNORA48.1-201ENST00000390879 135 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 RNU6-550P-201ENST00000391057 101 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 BTF3L4P2-201ENST00000392798 346 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 MTND3P17-201ENST00000416968 344 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 AL669831.1-202ENST00000428504 417 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 GTF2IP13-201ENST00000438487 386 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 MTND2P33-201ENST00000506452 1031 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 FAM206BP-201ENST00000510179 541 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 AC074344.1-201ENST00000512823 224 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 SNORD27.1-201ENST00000516319 72 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 AC087441.2-201ENST00000529141 262 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 AL356057.1-201ENST00000533798 831 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 MIR3198-2-201ENST00000577868 80 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 MIR548AB-201ENST00000584917 84 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 CYP2C61P-201ENST00000604072 290 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 AC016925.2-201ENST00000605108 242 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 AL022345.1-201ENST00000607292 135 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 AL133173.2-201ENST00000614270 90 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 AC063943.3-201ENST00000615562 356 ntBASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
ECHDC3Q96DC8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 SNORA72.3-201ENST00000365074 132 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 RNU5A-2P-201ENST00000384337 116 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 MIR320A-201ENST00000385302 82 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 AL031577.2-201ENST00000404133 280 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 RNU6-174P-201ENST00000410406 106 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 RNA5SP100-201ENST00000410903 110 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 RNA5SP59-201ENST00000410922 110 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 HIGD1AP15-201ENST00000416198 280 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 AL513185.2-201ENST00000425543 193 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 AL591043.1-201ENST00000432461 424 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 KATNBL1P3-201ENST00000443475 909 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 RNA5SP458-201ENST00000516188 119 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 RNU6-415P-201ENST00000516252 97 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 AC087883.1-201ENST00000551882 391 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 AC015720.1-201ENST00000565251 277 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 MIR3169-201ENST00000578032 83 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 MIR4775-201ENST00000581168 75 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 AC008752.3-201ENST00000588113 712 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 BNIP3P8-201ENST00000597863 560 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 ZNF680P1-201ENST00000436625 1469 ntBASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
ECHDC3Q96DC8 RNU4-15P-201ENST00000362613 141 ntBASIC1.47□□□□□ -2.17
ECHDC3Q96DC8 Y_RNA.140-201ENST00000363474 103 ntBASIC1.47□□□□□ -2.17
ECHDC3Q96DC8 RNU6-743P-201ENST00000364151 106 ntBASIC1.47□□□□□ -2.17
ECHDC3Q96DC8 MIR544A-201ENST00000384855 91 ntBASIC1.47□□□□□ -2.17
ECHDC3Q96DC8 MIR30A-201ENST00000385092 71 ntBASIC1.47□□□□□ -2.17
ECHDC3Q96DC8 AC010099.3-201ENST00000423896 409 ntBASIC1.47□□□□□ -2.17
ECHDC3Q96DC8 AL354695.1-201ENST00000427935 228 ntBASIC1.47□□□□□ -2.17
ECHDC3Q96DC8 AC243964.1-201ENST00000441814 261 ntBASIC1.47□□□□□ -2.17
ECHDC3Q96DC8 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 191.4 ms