Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU6-968P-201ENST00000384076 107 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 SNORA7.4-201ENST00000384249 137 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 RNU6-1222P-201ENST00000384615 107 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 RNU6-748P-201ENST00000384648 107 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 RNU6-750P-201ENST00000390946 107 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 RNU6-985P-201ENST00000410182 104 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 RPS27P29-201ENST00000463110 252 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 SNRPGP7-201ENST00000469016 106 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 MTND4LP22-201ENST00000508209 276 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 RNA5SP217-201ENST00000515959 91 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 RNA5SP380-201ENST00000517190 98 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 Y_RNA.721-201ENST00000517207 102 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 AC007375.1-201ENST00000554513 578 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 HSBP1P1-201ENST00000555205 166 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 MIR3200-201ENST00000580767 85 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 AC060766.3-201ENST00000591442 263 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 AC136443.5-201ENST00000603741 370 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 AC096772.1-201ENST00000609146 564 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 AL162373.1-201ENST00000620433 407 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 RBBP8P1-201ENST00000449447 1844 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 SNORA38.1-201ENST00000364172 131 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 RNU6-1141P-201ENST00000364520 107 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 RNU6-805P-201ENST00000365643 106 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 MIR147B-201ENST00000390185 80 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 RNA5SP354-201ENST00000391247 136 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 AL353705.4-201ENST00000449661 238 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 MTND5P22-201ENST00000458380 195 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 RNU4-77P-201ENST00000516692 156 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 RN7SKP57-201ENST00000517248 293 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 AC091144.1-201ENST00000519573 138 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 AC105137.2-201ENST00000569073 466 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 MIR5004-201ENST00000579078 107 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 MIR4680-201ENST00000580906 66 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 MIR1244-1-201ENST00000612829 85 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 MIR8057-201ENST00000620957 69 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 AC007792.1-201ENST00000623023 402 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 MIR1244-3-201ENST00000635744 85 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 MIR1244-2-201ENST00000636449 85 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 MIR1244-4-202ENST00000636813 85 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 AC008669.1-201ENST00000565823 2178 ntBASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CTHRC1Q96CG8 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 RNU4-9P-201ENST00000364951 139 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 Y_RNA.389-201ENST00000383924 113 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 MIR767-201ENST00000390228 109 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 SNORA69.1-201ENST00000390904 137 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 RNA5SP293-201ENST00000410527 113 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 RNA5SP494-201ENST00000410653 129 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AC113618.1-201ENST00000416747 285 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AL365496.1-201ENST00000426885 215 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AC078809.1-201ENST00000427601 140 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 RPS12P18-201ENST00000442381 270 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 RPL39P29-201ENST00000447779 157 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AC091179.1-201ENST00000461606 579 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AP001025.1-201ENST00000486139 332 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AC006483.1-201ENST00000487308 313 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AC016632.1-201ENST00000503994 196 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AC021146.2-201ENST00000504736 556 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 RNU6-764P-201ENST00000516396 105 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 SNORA74D-201ENST00000516404 141 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 Y_RNA.706-201ENST00000516933 99 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 RNU6-1137P-201ENST00000517073 99 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AC009812.2-201ENST00000517657 457 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AC016256.1-201ENST00000547971 354 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 HSPE1P4-201ENST00000550617 308 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 DNAJC8P1-201ENST00000554535 372 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AC104581.2-201ENST00000572227 430 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AC012493.2-201ENST00000595083 291 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AC016727.2-201ENST00000603988 621 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AC100812.1-201ENST00000607622 580 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 RNU6-91P-201ENST00000607774 107 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 253.9 ms