Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 AC019159.1-201ENST00000605094 187 ntBASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 SNORD58B-201ENST00000607313 66 ntBASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 AL138825.1-201ENST00000618587 192 ntBASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 AC008121.3-201ENST00000618726 433 ntBASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 MIR4272-201ENST00000635924 64 ntBASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 MIR3529-201ENST00000637713 78 ntBASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
ATG4AQ8WYN0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
ATG4AQ8WYN0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.09□□□□□ -1.92
ATG4AQ8WYN0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 MIR22-201ENST00000362190 85 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 RNU4-42P-201ENST00000364738 142 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 Y_RNA.333-201ENST00000365274 102 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 RNA5SP252-201ENST00000391131 119 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 Y_RNA.645-201ENST00000391229 102 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 RNU6-1077P-201ENST00000410506 102 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 AC023141.4-201ENST00000412031 328 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 AC007098.1-201ENST00000420122 367 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 AL358176.2-201ENST00000425769 204 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 AL161651.1-201ENST00000440882 223 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 AC007969.2-201ENST00000441891 191 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 AC112492.4-201ENST00000456549 352 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 AC117440.1-201ENST00000474107 571 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 AC097462.2-201ENST00000504623 481 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 AC021146.2-201ENST00000504736 556 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 SNORA31.1-201ENST00000515993 133 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 SNORA31.5-201ENST00000516190 133 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 ACA59.2-201ENST00000517061 156 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 AC009812.2-201ENST00000517657 457 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 AL078596.1-201ENST00000624856 447 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 MIR622-201ENST00000638396 96 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 AC009541.1-201ENST00000438279 2662 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 HAUS6P2-201ENST00000433254 2404 ntBASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATG4AQ8WYN0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 RNA5SP72-201ENST00000364442 117 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 Y_RNA.455-201ENST00000384230 98 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 RNU6-843P-201ENST00000384454 104 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 RNU6-1105P-201ENST00000384774 107 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 RNU4-47P-201ENST00000410876 114 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 AL451074.5-201ENST00000415894 435 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 RPS29P6-201ENST00000438196 145 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 AL513124.1-201ENST00000450410 614 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 AL353752.1-201ENST00000454946 260 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 RN7SKP210-201ENST00000459176 261 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 RPS29P2-201ENST00000479278 136 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 RN7SL504P-201ENST00000494496 287 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 SNORD19.2-201ENST00000516978 73 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 Y_RNA.721-201ENST00000517207 102 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 SNORA31.23-201ENST00000517219 133 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 AL590705.4-201ENST00000532209 134 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 AC060766.3-201ENST00000591442 263 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 AC104695.3-201ENST00000604052 296 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 MIR1244-1-201ENST00000612829 85 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 MIR1244-3-201ENST00000635744 85 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 MIR1244-2-201ENST00000636449 85 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 MIR1244-4-202ENST00000636813 85 ntBASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
ATG4AQ8WYN0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 Y_RNA.133-201ENST00000363428 110 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 SNORD32A-201ENST00000364805 84 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 SNORA51.4-201ENST00000364993 124 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 RNU1-140P-201ENST00000365040 165 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 RNU6-487P-201ENST00000365430 104 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 Y_RNA.485-201ENST00000384395 102 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 MIR34B-201ENST00000385076 84 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 MTCYBP2-201ENST00000407745 171 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 AC092423.1-201ENST00000430165 186 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 AC091812.1-201ENST00000432235 1948 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 AL031659.1-201ENST00000447075 539 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 CHEK2P4-201ENST00000450340 246 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 RNU5F-8P-201ENST00000515941 111 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms