Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SVIPQ8NHG7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
SVIPQ8NHG7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SVIPQ8NHG7 RNA5SP123-201ENST00000363244 119 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 SNORA33-201ENST00000363664 130 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 RNA5SP72-201ENST00000364442 117 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 Y_RNA.395-201ENST00000383945 109 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 Y_RNA.424-201ENST00000384063 103 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 MIR152-201ENST00000385212 87 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 MIR106B-201ENST00000385301 82 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 MIR711-201ENST00000390201 76 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SVIPQ8NHG7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SVIPQ8NHG7 SDHCP2-201ENST00000398565 501 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 TMSB10P2-201ENST00000416049 131 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC2.17□□□□□ -2.06
SVIPQ8NHG7 RN7SL297P-201ENST00000483161 293 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 RN7SL272P-201ENST00000487762 289 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.17□□□□□ -2.06
SVIPQ8NHG7 RNU6-475P-201ENST00000516073 104 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 SNORA70.12-201ENST00000516084 153 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 SCARNA13-201ENST00000516672 275 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 AC100849.2-201ENST00000518324 519 ntTSL 2 BASIC2.17□□□□□ -2.06
SVIPQ8NHG7 SNRPCP6-201ENST00000528310 210 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC2.17□□□□□ -2.06
SVIPQ8NHG7 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC2.17□□□□□ -2.06
SVIPQ8NHG7 RN7SL785P-201ENST00000578437 253 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 RN7SL600P-201ENST00000581811 299 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 MIR4470-201ENST00000583453 72 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 MIR5188-201ENST00000583467 113 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 MIR4448-201ENST00000584360 86 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.17□□□□□ -2.06
SVIPQ8NHG7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.17□□□□□ -2.06
SVIPQ8NHG7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 MIR6511B1-201ENST00000612014 85 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 AC009053.4-201ENST00000614366 108 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 AC240442.1-201ENST00000616055 283 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 uc_338.22-201ENST00000622722 187 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 U6.115-201ENST00000636045 103 ntBASIC2.17□□□□□ -2.06
SVIPQ8NHG7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SVIPQ8NHG7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
SVIPQ8NHG7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.16□□□□□ -2.06
SVIPQ8NHG7 RNU6-626P-201ENST00000363354 107 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 RNU6-961P-201ENST00000363893 105 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 RNA5SP336-201ENST00000364189 117 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 Y_RNA.230-201ENST00000364348 109 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 RNU6-301P-201ENST00000384277 107 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 RNY1P14-201ENST00000384426 108 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 Y_RNA.535-201ENST00000384612 99 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 MIR1267-201ENST00000408723 78 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 RN7SKP119-201ENST00000410753 273 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 AL135786.1-201ENST00000415892 214 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC2.16□□□□□ -2.06
SVIPQ8NHG7 AL354761.1-201ENST00000434190 526 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC2.16□□□□□ -2.06
SVIPQ8NHG7 CHEK2P4-201ENST00000450340 246 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 Y_RNA.639-201ENST00000458981 102 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 snoU13.27-201ENST00000459278 104 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 AL133162.1-201ENST00000463228 453 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 RNA5SP20-201ENST00000515976 84 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 RN7SKP209-201ENST00000516888 304 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 RNU7-172P-201ENST00000517125 64 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 RNA5SP437-201ENST00000517249 129 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 MIR3131-201ENST00000583592 63 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 SNRPCP20-201ENST00000588011 210 ntBASIC2.16□□□□□ -2.06
SVIPQ8NHG7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SVIPQ8NHG7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SVIPQ8NHG7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.16□□□□□ -2.06
SVIPQ8NHG7 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SVIPQ8NHG7 SNORA27.1-201ENST00000362604 124 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 RNU4-50P-201ENST00000364361 141 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 SNORA62.3-201ENST00000365110 153 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 LAMTOR2-202ENST00000368304 521 ntTSL 2 BASIC2.15□□□□□ -2.07
SVIPQ8NHG7 RNU6-20P-201ENST00000384106 107 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 MIR562-201ENST00000384894 95 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 MIR130A-201ENST00000385274 89 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 MIR873-201ENST00000401120 77 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 AL355796.1-201ENST00000406706 323 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 MIR1269A-201ENST00000408636 105 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.15□□□□□ -2.07
SVIPQ8NHG7 AL121890.1-201ENST00000435457 205 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 AL035417.1-201ENST00000442754 214 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 AL137792.2-201ENST00000443484 235 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.15□□□□□ -2.07
SVIPQ8NHG7 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC2.15□□□□□ -2.07
SVIPQ8NHG7 RN7SL143P-201ENST00000496780 297 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 AC093852.1-201ENST00000503587 266 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 AC008834.1-201ENST00000511612 175 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 SNORA25.10-201ENST00000515926 124 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 RNU6-1278P-201ENST00000516130 107 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.15□□□□□ -2.07
SVIPQ8NHG7 MIR4709-201ENST00000577272 72 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.15□□□□□ -2.07
SVIPQ8NHG7 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC2.15□□□□□ -2.07
SVIPQ8NHG7 AL390123.1-201ENST00000603216 237 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 AL121655.1-201ENST00000605811 308 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 AC103810.8-201ENST00000607347 118 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 AL137847.3-201ENST00000611521 109 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC2.15□□□□□ -2.07
SVIPQ8NHG7 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms