Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 AC110079.1-202ENST00000635213 138 ntBASIC2.55□□□□□ -2
ZNF248Q8NDW4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.54□□□□□ -2
ZNF248Q8NDW4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.54□□□□□ -2
ZNF248Q8NDW4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.54□□□□□ -2
ZNF248Q8NDW4 SNORA63C-201ENST00000364578 129 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 Y_RNA.384-201ENST00000383909 102 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 RNU6-1013P-201ENST00000384180 107 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 RNU6-842P-201ENST00000384269 107 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.54□□□□□ -2
ZNF248Q8NDW4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 MIR548P-201ENST00000408336 84 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 RNU6-1025P-201ENST00000410629 104 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 AC243428.1-201ENST00000421099 264 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.54□□□□□ -2
ZNF248Q8NDW4 AL590383.1-201ENST00000428602 75 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 GPM6BP2-201ENST00000432046 144 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 AL359672.1-201ENST00000442302 409 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 AC009237.8-201ENST00000445492 379 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 GPM6BP1-201ENST00000446387 144 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.54□□□□□ -2
ZNF248Q8NDW4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.54□□□□□ -2
ZNF248Q8NDW4 ELOCP24-201ENST00000456370 334 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.54□□□□□ -2
ZNF248Q8NDW4 RPL7P42-201ENST00000481005 679 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.54□□□□□ -2
ZNF248Q8NDW4 RPS29P21-201ENST00000496272 170 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.54□□□□□ -2
ZNF248Q8NDW4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.54□□□□□ -2
ZNF248Q8NDW4 AC079140.5-201ENST00000507882 310 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 AC008716.1-201ENST00000511084 513 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 RPL39P5-202ENST00000512505 151 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 AC093303.1-201ENST00000514549 295 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 RNU6-1137P-201ENST00000517073 99 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 AC104576.1-201ENST00000524225 88 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 CYCSP27-201ENST00000527643 293 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.54□□□□□ -2
ZNF248Q8NDW4 AMZ2P1-203ENST00000565833 850 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 DEFB122-202ENST00000569013 197 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.54□□□□□ -2
ZNF248Q8NDW4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.54□□□□□ -2
ZNF248Q8NDW4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.54□□□□□ -2
ZNF248Q8NDW4 MIR3941-201ENST00000582572 103 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 ZNF861P-201ENST00000588126 639 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 AC080078.3-201ENST00000605407 463 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 AP000654.2-201ENST00000605633 586 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 Y_RNA.812-201ENST00000610788 101 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 Y_RNA.784-201ENST00000613803 101 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 Y_RNA.787-201ENST00000616522 101 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 Y_RNA.780-201ENST00000617336 101 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 Y_RNA.801-201ENST00000619005 101 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.54□□□□□ -2
ZNF248Q8NDW4 uc_338.22-201ENST00000622722 187 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 AC134503.1-201ENST00000633048 54 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 AL669831.3-213ENST00000636676 183 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
ZNF248Q8NDW4 AC092593.1-201ENST00000515413 1815 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 MTND5P30-201ENST00000452896 1731 ntBASIC2.54□□□□□ -2
ZNF248Q8NDW4 Y_RNA.5-201ENST00000362334 102 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 RNU6-1115P-201ENST00000362490 106 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 RNU6-1329P-201ENST00000365664 107 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 RNU6-166P-201ENST00000384371 107 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 RNU6-601P-201ENST00000384540 107 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 RNU6-1179P-201ENST00000384667 107 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 MIR181A2-201ENST00000384863 110 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 BX276092.3-201ENST00000424182 230 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 AC092427.1-202ENST00000430569 476 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 USP9YP30-201ENST00000430729 455 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 HMGB1P27-201ENST00000431429 603 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 AL137792.2-201ENST00000443484 235 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 RNA5SP384-201ENST00000516615 116 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.53□□□□□ -2
ZNF248Q8NDW4 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.53□□□□□ -2
ZNF248Q8NDW4 AC025755.1-201ENST00000521306 278 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 ATP5F1P5-201ENST00000526403 760 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.53□□□□□ -2
ZNF248Q8NDW4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.53□□□□□ -2
ZNF248Q8NDW4 TRAV28-201ENST00000557548 323 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 AC007151.1-201ENST00000572774 483 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 AC008739.2-201ENST00000597006 317 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 AL360085.1-201ENST00000604713 532 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 RNU6-85P-201ENST00000605989 107 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 MIR6128-201ENST00000615528 109 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 U2.21-201ENST00000637295 81 ntBASIC2.53□□□□□ -2
ZNF248Q8NDW4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
ZNF248Q8NDW4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
ZNF248Q8NDW4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
ZNF248Q8NDW4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.52□□□□□ -2.01
ZNF248Q8NDW4 Y_RNA.33-201ENST00000362591 102 ntBASIC2.52□□□□□ -2.01
ZNF248Q8NDW4 Y_RNA.151-201ENST00000363566 112 ntBASIC2.52□□□□□ -2.01
ZNF248Q8NDW4 RNU6-270P-201ENST00000364131 105 ntBASIC2.52□□□□□ -2.01
ZNF248Q8NDW4 Y_RNA.324-201ENST00000365165 102 ntBASIC2.52□□□□□ -2.01
ZNF248Q8NDW4 Y_RNA.482-201ENST00000384377 111 ntBASIC2.52□□□□□ -2.01
ZNF248Q8NDW4 Y_RNA.496-201ENST00000384444 101 ntBASIC2.52□□□□□ -2.01
ZNF248Q8NDW4 MIR559-201ENST00000385188 96 ntBASIC2.52□□□□□ -2.01
ZNF248Q8NDW4 SNORA40C-201ENST00000391285 128 ntBASIC2.52□□□□□ -2.01
ZNF248Q8NDW4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.52□□□□□ -2.01
ZNF248Q8NDW4 Y_RNA.594-201ENST00000410373 140 ntBASIC2.52□□□□□ -2.01
ZNF248Q8NDW4 RNU4-53P-201ENST00000410828 140 ntBASIC2.52□□□□□ -2.01
ZNF248Q8NDW4 Z98742.3-201ENST00000418637 326 ntBASIC2.52□□□□□ -2.01
ZNF248Q8NDW4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms