Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AC009541.1-201ENST00000438279 2662 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
KRT78Q8N1N4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
KRT78Q8N1N4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
KRT78Q8N1N4 OR56A5-201ENST00000340110 738 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 Y_RNA.5-201ENST00000362334 102 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 RNU6-1010P-201ENST00000362757 107 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 Y_RNA.149-201ENST00000363558 117 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 Y_RNA.158-201ENST00000363651 101 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 U3.13-201ENST00000364804 214 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 Y_RNA.476-201ENST00000384347 108 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 Y_RNA.527-201ENST00000384573 102 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 MIR490-201ENST00000384865 128 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 MRPL42P3-201ENST00000401492 326 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 RN7SKP220-201ENST00000410611 288 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 HMGB3P2-201ENST00000411913 584 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.15□□□□□ -1.91
KRT78Q8N1N4 AL035666.1-201ENST00000446195 348 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 RPS26P21-201ENST00000475397 348 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.15□□□□□ -1.91
KRT78Q8N1N4 AC026782.1-201ENST00000512952 449 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.15□□□□□ -1.91
KRT78Q8N1N4 RNU6-764P-201ENST00000516396 105 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 RNU6-1213P-201ENST00000517075 94 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
KRT78Q8N1N4 AL161670.1-201ENST00000554348 137 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 AC007375.1-201ENST00000554513 578 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 AC103810.1-201ENST00000579873 453 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 MIR5690-201ENST00000583739 73 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 AC069200.1-201ENST00000609511 323 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 AC007485.1-201ENST00000616755 206 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 PISRT1.1-201ENST00000616930 107 ntBASIC3.15□□□□□ -1.91
KRT78Q8N1N4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.15□□□□□ -1.91
KRT78Q8N1N4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
KRT78Q8N1N4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
KRT78Q8N1N4 AC010329.5-201ENST00000623497 2174 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 RNU1-70P-201ENST00000362618 164 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 RNA5SP119-201ENST00000362715 117 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 SNORA68.1-201ENST00000364537 132 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 AC117470.1-201ENST00000381974 330 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 Y_RNA.482-201ENST00000384377 111 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 MIR7-3-201ENST00000384898 110 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 RNA5SP293-201ENST00000410527 113 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 AP000275.1-201ENST00000411943 390 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 MCFD2P1-201ENST00000417812 300 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.14□□□□□ -1.91
KRT78Q8N1N4 SUMO1P2-201ENST00000452524 304 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 AC008571.1-201ENST00000467232 300 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 AC010655.3-201ENST00000478818 450 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
KRT78Q8N1N4 AC110794.1-201ENST00000505816 425 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.14□□□□□ -1.91
KRT78Q8N1N4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.14□□□□□ -1.91
KRT78Q8N1N4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.14□□□□□ -1.91
KRT78Q8N1N4 AC079598.5-201ENST00000547460 117 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 MIR3199-1-201ENST00000582434 88 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 AL137843.1-201ENST00000605078 385 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 MIR8076-201ENST00000611401 83 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 MIR7157-201ENST00000635801 60 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
KRT78Q8N1N4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.14□□□□□ -1.91
KRT78Q8N1N4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRT78Q8N1N4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRT78Q8N1N4 AC138915.1-201ENST00000565427 1685 ntBASIC3.14□□□□□ -1.91
KRT78Q8N1N4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRT78Q8N1N4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRT78Q8N1N4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
KRT78Q8N1N4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.13□□□□□ -1.91
KRT78Q8N1N4 RNA5SP383-201ENST00000362934 120 ntBASIC3.13□□□□□ -1.91
KRT78Q8N1N4 RNU6-1032P-201ENST00000384100 107 ntBASIC3.13□□□□□ -1.91
KRT78Q8N1N4 MIR218-1-201ENST00000384999 110 ntBASIC3.13□□□□□ -1.91
KRT78Q8N1N4 RNU2-23P-201ENST00000410545 195 ntBASIC3.13□□□□□ -1.91
KRT78Q8N1N4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.13□□□□□ -1.91
KRT78Q8N1N4 BX276092.3-201ENST00000424182 230 ntBASIC3.13□□□□□ -1.91
KRT78Q8N1N4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.13□□□□□ -1.91
KRT78Q8N1N4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.13□□□□□ -1.91
KRT78Q8N1N4 AC115115.1-201ENST00000449927 248 ntBASIC3.13□□□□□ -1.91
KRT78Q8N1N4 U8.20-201ENST00000459445 131 ntBASIC3.13□□□□□ -1.91
KRT78Q8N1N4 SNORA64.4-201ENST00000516632 81 ntBASIC3.13□□□□□ -1.91
KRT78Q8N1N4 RN7SKP282-201ENST00000516824 299 ntBASIC3.13□□□□□ -1.91
KRT78Q8N1N4 AC115990.1-201ENST00000526957 301 ntBASIC3.13□□□□□ -1.91
KRT78Q8N1N4 HSPE1P4-201ENST00000550617 308 ntBASIC3.13□□□□□ -1.91
KRT78Q8N1N4 IMMP1LP2-201ENST00000552954 492 ntBASIC3.13□□□□□ -1.91
KRT78Q8N1N4 MIR4273-201ENST00000582824 84 ntBASIC3.13□□□□□ -1.91
KRT78Q8N1N4 AL512605.2-201ENST00000592972 256 ntBASIC3.13□□□□□ -1.91
KRT78Q8N1N4 AL356157.2-201ENST00000605122 111 ntBASIC3.13□□□□□ -1.91
KRT78Q8N1N4 HMGB1P24-202ENST00000615653 685 ntBASIC3.13□□□□□ -1.91
KRT78Q8N1N4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.13□□□□□ -1.91
KRT78Q8N1N4 AL162373.1-201ENST00000620433 407 ntBASIC3.13□□□□□ -1.91
KRT78Q8N1N4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRT78Q8N1N4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
KRT78Q8N1N4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.12□□□□□ -1.91
KRT78Q8N1N4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
KRT78Q8N1N4 RNU6-1115P-201ENST00000362490 106 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 Y_RNA.176-201ENST00000363815 109 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 RNU6-1141P-201ENST00000364520 107 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms