Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.25□□□□□ -1.89
VRK3Q8IV63 MED28P6-201ENST00000558776 231 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 AC090617.3-201ENST00000573670 475 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 AC019176.2-201ENST00000611579 315 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 AC012314.7-201ENST00000619693 93 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
VRK3Q8IV63 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VRK3Q8IV63 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VRK3Q8IV63 AC017071.1-201ENST00000564407 2204 ntBASIC3.24□□□□□ -1.89
VRK3Q8IV63 Y_RNA.54-201ENST00000362766 105 ntBASIC3.24□□□□□ -1.89
VRK3Q8IV63 Y_RNA.83-201ENST00000363005 113 ntBASIC3.24□□□□□ -1.89
VRK3Q8IV63 RNU6-774P-201ENST00000363238 107 ntBASIC3.24□□□□□ -1.89
VRK3Q8IV63 Y_RNA.123-201ENST00000363338 102 ntBASIC3.24□□□□□ -1.89
VRK3Q8IV63 SNORD63-201ENST00000384262 68 ntBASIC3.24□□□□□ -1.89
VRK3Q8IV63 RNU6-378P-201ENST00000384324 107 ntBASIC3.24□□□□□ -1.89
VRK3Q8IV63 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
VRK3Q8IV63 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.24□□□□□ -1.89
VRK3Q8IV63 TOMM20P4-201ENST00000427861 435 ntBASIC3.24□□□□□ -1.89
VRK3Q8IV63 AC005300.1-201ENST00000428401 373 ntBASIC3.24□□□□□ -1.89
VRK3Q8IV63 AL445305.1-201ENST00000432577 575 ntBASIC3.24□□□□□ -1.89
VRK3Q8IV63 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.24□□□□□ -1.89
VRK3Q8IV63 AC092798.1-201ENST00000458542 409 ntBASIC3.24□□□□□ -1.89
VRK3Q8IV63 AC010401.1-201ENST00000463867 348 ntBASIC3.24□□□□□ -1.89
VRK3Q8IV63 RNU6-1256P-201ENST00000516539 103 ntBASIC3.24□□□□□ -1.89
VRK3Q8IV63 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.24□□□□□ -1.89
VRK3Q8IV63 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.24□□□□□ -1.89
VRK3Q8IV63 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.24□□□□□ -1.89
VRK3Q8IV63 U2.14-201ENST00000615943 113 ntBASIC3.24□□□□□ -1.89
VRK3Q8IV63 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.24□□□□□ -1.89
VRK3Q8IV63 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
VRK3Q8IV63 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
VRK3Q8IV63 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VRK3Q8IV63 PWAR6-201ENST00000552334 4618 ntBASIC3.23□□□□□ -1.89
VRK3Q8IV63 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.23□□□□□ -1.89
VRK3Q8IV63 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
VRK3Q8IV63 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VRK3Q8IV63 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VRK3Q8IV63 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VRK3Q8IV63 RNU6-545P-201ENST00000362681 104 ntBASIC3.23□□□□□ -1.89
VRK3Q8IV63 RNU6-335P-201ENST00000364563 113 ntBASIC3.23□□□□□ -1.89
VRK3Q8IV63 MIR1290-201ENST00000408735 78 ntBASIC3.23□□□□□ -1.89
VRK3Q8IV63 AL356867.1-201ENST00000429623 299 ntBASIC3.23□□□□□ -1.89
VRK3Q8IV63 snoU13.24-201ENST00000458998 104 ntBASIC3.23□□□□□ -1.89
VRK3Q8IV63 PHBP14-201ENST00000512887 367 ntBASIC3.23□□□□□ -1.89
VRK3Q8IV63 RNA5SP290-201ENST00000517133 127 ntBASIC3.23□□□□□ -1.89
VRK3Q8IV63 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.23□□□□□ -1.89
VRK3Q8IV63 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
VRK3Q8IV63 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.23□□□□□ -1.89
VRK3Q8IV63 AC069200.1-201ENST00000609511 323 ntBASIC3.23□□□□□ -1.89
VRK3Q8IV63 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
VRK3Q8IV63 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
VRK3Q8IV63 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VRK3Q8IV63 RNU6-1301P-201ENST00000362724 104 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 SNORD113-8-201ENST00000363497 74 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 RNU4-9P-201ENST00000364951 139 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 RNU5E-7P-201ENST00000365290 117 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VRK3Q8IV63 SNORD78.2-201ENST00000391076 69 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 MTCO2P33-201ENST00000402100 465 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 RNA5SP229-201ENST00000410809 99 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 Y_RNA.793-201ENST00000411222 111 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 AL358453.1-201ENST00000422522 250 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 RPL21P40-201ENST00000428586 483 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 AL078601.1-201ENST00000444542 271 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.22□□□□□ -1.89
VRK3Q8IV63 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.22□□□□□ -1.89
VRK3Q8IV63 snoU13.30-201ENST00000458951 104 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 RNU7-87P-201ENST00000459343 62 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 AC010285.1-201ENST00000470580 392 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 AP002884.2-201ENST00000471647 395 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.22□□□□□ -1.89
VRK3Q8IV63 SERF1AP1-201ENST00000514575 187 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 SNORA31.18-201ENST00000517043 134 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 AC023824.2-201ENST00000566185 400 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 MIR4659A-201ENST00000580269 81 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 AC010928.2-201ENST00000588017 287 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 AC099778.2-201ENST00000610904 211 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 uc_338.1-201ENST00000612113 180 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.22□□□□□ -1.89
VRK3Q8IV63 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.22□□□□□ -1.89
VRK3Q8IV63 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.22□□□□□ -1.89
VRK3Q8IV63 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
VRK3Q8IV63 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VRK3Q8IV63 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.22□□□□□ -1.89
VRK3Q8IV63 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VRK3Q8IV63 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.22□□□□□ -1.89
VRK3Q8IV63 AL133383.2-201ENST00000622958 2336 ntBASIC3.21□□□□□ -1.89
VRK3Q8IV63 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
VRK3Q8IV63 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VRK3Q8IV63 AP001148.1-201ENST00000624124 2359 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 RNU6-78P-201ENST00000362897 107 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 Y_RNA.76-201ENST00000362931 109 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 Y_RNA.199-201ENST00000364014 102 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 SNORD113-1-201ENST00000365321 69 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 RNU6-741P-201ENST00000383889 107 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 RNU6-17P-201ENST00000384245 107 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 RNU6-937P-201ENST00000384325 106 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 RNU6-102P-201ENST00000384485 104 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 RNU6-18P-201ENST00000384527 107 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms