Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 SSXP5-201ENST00000443473 287 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 AC116655.1-201ENST00000508324 901 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-1046P-201ENST00000516538 107 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 Y_RNA.687-201ENST00000516558 91 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-264P-201ENST00000517134 104 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 SNORD116.3-201ENST00000517176 78 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 ZNF861P-201ENST00000588126 639 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 AP000942.4-201ENST00000604811 241 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 MIR3976-201ENST00000606807 139 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 U6.99-201ENST00000637524 83 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 U4.7-201ENST00000638126 106 ntBASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
UBE3BQ7Z3V4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 MTND5P16-201ENST00000460269 1703 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 Y_RNA.133-201ENST00000363428 110 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 Y_RNA.364-201ENST00000365532 101 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 RNU1-73P-201ENST00000383971 164 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 Y_RNA.459-201ENST00000384251 102 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 MIR181A2-201ENST00000384863 110 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 MIR518D-201ENST00000385014 87 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 RPS29P13-201ENST00000402041 169 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 TMEM167AP1-201ENST00000423409 219 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 AC099799.1-201ENST00000439809 192 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 GSTA11P-201ENST00000452866 669 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 U8.21-201ENST00000459536 136 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 AC022447.4-201ENST00000504053 364 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 Y_RNA.661-201ENST00000516003 99 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 AC103996.1-201ENST00000555468 102 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 AC090115.4-201ENST00000609970 188 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 AC006157.1-201ENST00000611750 366 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 AC004852.3-201ENST00000614131 326 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 AC002076.2-201ENST00000617362 122 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 SNORA50A-202ENST00000629536 136 ntBASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
UBE3BQ7Z3V4 AL136360.1-201ENST00000503377 1900 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 GABRG2-229ENST00000641017 3628 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 SNORA51.4-201ENST00000364993 124 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 RNU5E-7P-201ENST00000365290 117 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-1035P-201ENST00000384477 107 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 U3.37-201ENST00000408528 213 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 AL160004.2-201ENST00000432935 350 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 RPL23AP50-201ENST00000434149 455 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 RNA5SP310-201ENST00000459084 116 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 AC133134.1-201ENST00000466800 359 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 AP004217.1-201ENST00000480579 346 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 RPL17P19-201ENST00000489069 552 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 AC010265.1-201ENST00000513509 211 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-711P-201ENST00000517255 106 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 IGHV3-76-201ENST00000522465 295 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 LINC00933-203ENST00000559812 219 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 AC005014.2-201ENST00000607795 599 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 MIR8076-201ENST00000611401 83 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 CUL1P1-201ENST00000509510 2425 ntBASIC3.44□□□□□ -1.86
UBE3BQ7Z3V4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 MIR449A-201ENST00000362113 91 ntBASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-78P-201ENST00000362897 107 ntBASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-1105P-201ENST00000384774 107 ntBASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 MIR9-1-201ENST00000385198 89 ntBASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 EIF4EP2-201ENST00000422816 654 ntBASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 HMGN2P30-201ENST00000423237 256 ntBASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 ARL5AP4-201ENST00000430731 512 ntBASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 AC098831.1-201ENST00000440661 216 ntBASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 AC114801.2-201ENST00000503825 781 ntBASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 AC021146.2-201ENST00000504736 556 ntBASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-377P-201ENST00000515965 102 ntBASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-475P-201ENST00000516073 104 ntBASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 CBX3P8-201ENST00000532412 525 ntBASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 GNAI2P1-201ENST00000541815 315 ntBASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 MIR5696-201ENST00000578474 85 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms