Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MIR4719-201ENST00000585233 84 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 RPS15AP11-201ENST00000594193 385 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 RNU6-91P-201ENST00000607774 107 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 AC090115.4-201ENST00000609970 188 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 SCARNA17.4-201ENST00000614296 143 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 MIR7112-201ENST00000616126 65 ntBASIC2.6□□□□□ -1.99
SHFQ7M4L6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.6□□□□□ -1.99
SHFQ7M4L6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SHFQ7M4L6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.59□□□□□ -1.99
SHFQ7M4L6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SHFQ7M4L6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SHFQ7M4L6 Y_RNA.48-201ENST00000362710 103 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 Y_RNA.123-201ENST00000363338 102 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 Y_RNA.138-201ENST00000363462 102 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 Y_RNA.146-201ENST00000363549 102 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 SNORD42.2-201ENST00000365570 69 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 RNU6-784P-201ENST00000384330 106 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 MIR7-3-201ENST00000384898 110 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 MIR512-1-201ENST00000384913 84 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 BTF3L4P2-201ENST00000392798 346 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 RPL19P1-201ENST00000411635 428 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.59□□□□□ -1.99
SHFQ7M4L6 AC243428.1-201ENST00000421099 264 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 AL358075.3-201ENST00000426289 226 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 RPL23AP95-201ENST00000426806 265 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.59□□□□□ -1.99
SHFQ7M4L6 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.59□□□□□ -1.99
SHFQ7M4L6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.59□□□□□ -1.99
SHFQ7M4L6 AC079354.2-201ENST00000453523 154 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 AL441985.1-201ENST00000457727 251 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 RPS29P12-201ENST00000460178 152 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.59□□□□□ -1.99
SHFQ7M4L6 RNU6-120P-201ENST00000516077 103 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.59□□□□□ -1.99
SHFQ7M4L6 CBX3P8-201ENST00000532412 525 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 ELOCP31-201ENST00000540463 467 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.59□□□□□ -1.99
SHFQ7M4L6 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.59□□□□□ -1.99
SHFQ7M4L6 AL158827.2-201ENST00000602494 330 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 RPL23AP88-201ENST00000605759 454 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 AC069200.1-201ENST00000609511 323 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 AC009318.2-201ENST00000610917 651 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.59□□□□□ -1.99
SHFQ7M4L6 AL691447.3-201ENST00000635020 330 ntBASIC2.59□□□□□ -1.99
SHFQ7M4L6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.59□□□□□ -2
SHFQ7M4L6 Z82195.2-201ENST00000612348 18351 ntBASIC2.59□□□□□ -2
SHFQ7M4L6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
SHFQ7M4L6 AP003122.5-201ENST00000527668 3766 ntBASIC2.59□□□□□ -2
SHFQ7M4L6 MTND5P10-201ENST00000603719 1809 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.58□□□□□ -2
SHFQ7M4L6 AC009541.1-201ENST00000438279 2662 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 MIR369-201ENST00000362155 70 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 VTRNA1-1-201ENST00000363120 99 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 Y_RNA.533-201ENST00000384596 114 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 AL139095.1-201ENST00000404326 391 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.58□□□□□ -2
SHFQ7M4L6 EIF4EP2-201ENST00000422816 654 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.58□□□□□ -2
SHFQ7M4L6 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.58□□□□□ -2
SHFQ7M4L6 RPL39P29-201ENST00000447779 157 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 SNORA84-201ENST00000459229 133 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 RPL31P41-201ENST00000477967 372 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.58□□□□□ -2
SHFQ7M4L6 RNU6-1170P-201ENST00000515974 106 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 AC004486.1-201ENST00000546846 233 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 MIR4273-201ENST00000582824 84 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 AC012493.2-201ENST00000595083 291 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 AL080274.1-201ENST00000605565 220 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 uc_338.14-201ENST00000613162 166 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 AC133104.2-201ENST00000615272 193 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 HMGB1P24-202ENST00000615653 685 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 AC091953.5-201ENST00000622919 233 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.58□□□□□ -2
SHFQ7M4L6 AC092435.3-201ENST00000565538 3654 ntBASIC2.58□□□□□ -2
SHFQ7M4L6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.58□□□□□ -2
SHFQ7M4L6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.57□□□□□ -2
SHFQ7M4L6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.57□□□□□ -2
SHFQ7M4L6 MTND5P9-201ENST00000503854 1755 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
SHFQ7M4L6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.57□□□□□ -2
SHFQ7M4L6 RNU6-1040P-201ENST00000383974 107 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 RNU6-851P-201ENST00000384565 107 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 RNU6-1222P-201ENST00000384615 107 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 U3.26-201ENST00000391236 204 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 HMGN2P35-201ENST00000412164 270 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 MTCO2P12-201ENST00000427426 682 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.57□□□□□ -2
SHFQ7M4L6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.57□□□□□ -2
SHFQ7M4L6 PRSS3P4-201ENST00000453323 162 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 AP000705.1-201ENST00000454567 350 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 Y_RNA.639-201ENST00000458981 102 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 MIR2053-201ENST00000459295 91 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 SNRPGP7-201ENST00000469016 106 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 AC103975.1-201ENST00000482506 483 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.57□□□□□ -2
SHFQ7M4L6 AC022447.4-201ENST00000504053 364 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.57□□□□□ -2
SHFQ7M4L6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.57□□□□□ -2
SHFQ7M4L6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.57□□□□□ -2
SHFQ7M4L6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms