Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 SNORD50.1-201ENST00000362987 71 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 RNU6-525P-201ENST00000363685 104 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 Y_RNA.210-201ENST00000364161 110 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 SNORD14.1-201ENST00000365609 90 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 RNU6-741P-201ENST00000383889 107 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 RNU6-1026P-201ENST00000384465 108 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 SNORA48.8-201ENST00000391324 134 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 AC007919.1-201ENST00000429380 217 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 SETP5-201ENST00000437270 562 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 RPS29P27-201ENST00000463711 170 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 MTND4LP22-201ENST00000508209 276 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 RNA5SP385-201ENST00000515947 110 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 SNORA31.19-201ENST00000517079 126 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 ATP5F1P5-201ENST00000526403 760 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 TRAV28-201ENST00000557548 323 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 MIR4273-201ENST00000582824 84 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 AC090115.4-201ENST00000609970 188 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 AL110115.1-201ENST00000614396 364 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 AL161629.2-201ENST00000615347 275 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 AL136164.4-201ENST00000625013 2135 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 AL359693.1-201ENST00000614959 2407 ntBASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
ZNF549Q6P9A3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 Y_RNA.26-201ENST00000362539 101 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 RNU6-379P-201ENST00000363813 104 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 RNU6-595P-201ENST00000363944 107 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 SNORA9.2-201ENST00000365361 133 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 Y_RNA.424-201ENST00000384063 103 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 Y_RNA.556-201ENST00000384677 113 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 MIR10A-201ENST00000385043 110 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 EIF4EP2-201ENST00000422816 654 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 AL356867.1-201ENST00000429623 299 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 PIGFP3-201ENST00000441918 722 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 AC073910.1-201ENST00000445047 438 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 AC079354.2-201ENST00000453523 154 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 AC092798.1-201ENST00000458542 409 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 RPS29P26-201ENST00000477483 171 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 AC093852.1-201ENST00000503587 266 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 RNA5SP165-201ENST00000517142 115 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 AC040926.1-201ENST00000530195 238 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 AC103996.1-201ENST00000555468 102 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 AC005046.1-201ENST00000608515 625 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 MIR1244-1-201ENST00000612829 85 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 MIR8062-201ENST00000621515 85 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 MIR1244-3-201ENST00000635744 85 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 MIR1244-2-201ENST00000636449 85 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 MIR1244-4-202ENST00000636813 85 ntBASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
ZNF549Q6P9A3 MTND5P7-201ENST00000413558 1798 ntBASIC2.84□□□□□ -1.96
ZNF549Q6P9A3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.84□□□□□ -1.96
ZNF549Q6P9A3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 RNU6-874P-201ENST00000362390 105 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 RNU6-428P-201ENST00000362942 107 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 Y_RNA.214-201ENST00000364201 112 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 Y_RNA.222-201ENST00000364264 102 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 Y_RNA.276-201ENST00000364732 109 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 Y_RNA.307-201ENST00000365022 117 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 MIR512-1-201ENST00000384913 84 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 SNORA48.5-201ENST00000391143 135 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 AL590004.2-201ENST00000404787 371 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 AL591034.1-201ENST00000407447 340 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 MIR1290-201ENST00000408735 78 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 RN7SKP123-201ENST00000410732 291 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 YPEL5P1-201ENST00000419731 367 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 ELOCP20-201ENST00000422460 345 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 AC092047.1-201ENST00000424997 240 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 DYNLT3P2-201ENST00000442517 295 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 AC133134.1-201ENST00000466800 359 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 RNU6-408P-201ENST00000515910 100 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 RNA5SP341-201ENST00000516261 117 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 RNU6-572P-201ENST00000516724 80 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms