Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RNU6-552P-201ENST00000362869 119 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 RNU6-1141P-201ENST00000364520 107 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 RNU6-692P-201ENST00000384496 107 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 RNU11-3P-201ENST00000391111 133 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 RNU6-903P-201ENST00000391270 109 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 MIR1294-201ENST00000408503 142 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 AL139156.1-201ENST00000412785 841 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.82□□□□□ -2.12
NIPAL3Q6P499 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.82□□□□□ -2.12
NIPAL3Q6P499 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.82□□□□□ -2.12
NIPAL3Q6P499 BX510359.4-201ENST00000423750 193 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 HMGN2P19-201ENST00000425149 265 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 AC027124.2-201ENST00000428249 105 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.82□□□□□ -2.12
NIPAL3Q6P499 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.82□□□□□ -2.12
NIPAL3Q6P499 MTND2P29-201ENST00000438595 412 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 MTND1P26-201ENST00000440488 538 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.82□□□□□ -2.12
NIPAL3Q6P499 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.82□□□□□ -2.12
NIPAL3Q6P499 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.82□□□□□ -2.12
NIPAL3Q6P499 AC009646.1-201ENST00000510455 318 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.82□□□□□ -2.12
NIPAL3Q6P499 MRPS17P9-201ENST00000511924 393 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 RNA5SP364-201ENST00000516938 78 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 AL137161.1-201ENST00000532231 390 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 AC022880.1-201ENST00000534017 973 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 TRAV32-201ENST00000553993 340 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 OR11H5P-201ENST00000554039 926 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 AC007375.1-201ENST00000554513 578 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.82□□□□□ -2.12
NIPAL3Q6P499 MTATP6P3-201ENST00000581686 676 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 MIR3136-201ENST00000583498 78 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 AC008752.3-201ENST00000588113 712 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.82□□□□□ -2.12
NIPAL3Q6P499 APOOP1-201ENST00000604695 592 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 U2.17-201ENST00000611454 95 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 Y_RNA.783-201ENST00000613546 102 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 DUXAP9-208ENST00000622815 614 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 SNORD98-201ENST00000636377 67 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 MIR3974-201ENST00000637126 96 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 AC241585.2-209ENST00000638217 143 ntBASIC1.82□□□□□ -2.12
NIPAL3Q6P499 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
NIPAL3Q6P499 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.82□□□□□ -2.12
NIPAL3Q6P499 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
NIPAL3Q6P499 Y_RNA.159-201ENST00000363674 87 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
NIPAL3Q6P499 RNU5A-6P-201ENST00000384136 116 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 SNORA70B-201ENST00000384210 135 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 RNU6-43P-201ENST00000384302 107 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AF228730.1-201ENST00000397972 663 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 MIR1283-2-201ENST00000408621 87 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AC090960.1-201ENST00000421072 306 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AC010975.2-201ENST00000427781 588 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AC073464.1-201ENST00000429823 534 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 HMGN2P3-201ENST00000433603 273 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AC244670.1-201ENST00000436879 112 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 HMGN2P5-201ENST00000436882 273 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AC013470.1-201ENST00000453438 462 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AK3P2-201ENST00000507976 429 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AC093259.1-201ENST00000509755 300 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.81□□□□□ -2.12
NIPAL3Q6P499 RNU6-991P-201ENST00000516168 107 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AC026407.1-201ENST00000518369 204 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AP005660.1-201ENST00000522972 293 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AL356057.1-201ENST00000533798 831 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 MTCO3P23-201ENST00000561363 289 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AGGF1P4-201ENST00000568249 801 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 MIR4648-201ENST00000580107 72 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 VN1R107P-201ENST00000601784 209 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AP000654.2-201ENST00000605633 586 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AP001596.2-201ENST00000608410 312 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.81□□□□□ -2.12
NIPAL3Q6P499 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AL773524.1-201ENST00000614065 229 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AC136475.10-201ENST00000620253 385 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AC091932.3-201ENST00000624223 323 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 AC005609.4-201ENST00000625071 447 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 MIR1248-201ENST00000629190 106 ntBASIC1.81□□□□□ -2.12
NIPAL3Q6P499 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
NIPAL3Q6P499 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NIPAL3Q6P499 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.8□□□□□ -2.12
NIPAL3Q6P499 Y_RNA.99-201ENST00000363138 105 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 RNU4-56P-201ENST00000364700 142 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 Y_RNA.399-201ENST00000383955 105 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 GSTA9P-201ENST00000406231 611 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 RNU2-40P-201ENST00000410833 196 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.8□□□□□ -2.12
NIPAL3Q6P499 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.8□□□□□ -2.12
NIPAL3Q6P499 AL117339.3-201ENST00000418733 162 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 AC244636.1-201ENST00000421152 228 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 MTCO2P34-201ENST00000421994 607 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.8□□□□□ -2.12
NIPAL3Q6P499 RNU7-167P-201ENST00000459160 62 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.8□□□□□ -2.12
NIPAL3Q6P499 AC145146.1-201ENST00000496370 254 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms