Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SCARNA3-201ENST00000517097 143 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 ROCK1P1-201ENST00000573767 549 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 AC015688.2-201ENST00000584523 262 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 AC121334.2-201ENST00000605387 271 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 RNU6-884P-201ENST00000363889 107 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 SNORD114-12-201ENST00000365400 75 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 RNU6-532P-201ENST00000384318 107 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 MIR1290-201ENST00000408735 78 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 AC099677.2-201ENST00000436385 175 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 U8.21-201ENST00000459536 136 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 AC113410.1-201ENST00000505029 247 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 AC023157.2-201ENST00000540596 141 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 FTX_2.1-201ENST00000618816 94 ntBASIC-0.28□□□□□ -2.45
VPS13DQ5THJ4 RNU1-39P-201ENST00000383897 165 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 AC022861.1-201ENST00000522981 663 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 AL583856.2-201ENST00000606298 543 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 RNU6-925P-201ENST00000384629 104 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 RNU6-750P-201ENST00000390946 107 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 BEND7P1-201ENST00000422058 457 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 RAB28P5-201ENST00000427490 651 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 RNFT1P2-201ENST00000443064 757 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 MTND5P13-201ENST00000513046 1079 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 LSM6P2-201ENST00000552208 177 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 AC012065.4-201ENST00000602445 679 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 RAC1P6-201ENST00000423911 575 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 AC104332.1-201ENST00000440471 797 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 AC011005.2-201ENST00000487324 359 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 AC079140.3-201ENST00000511111 550 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 SNORA25.12-201ENST00000516202 82 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 RNU6-567P-201ENST00000516746 107 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 AP003066.2-201ENST00000529375 555 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 NACAP3-201ENST00000552100 481 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 MIR5697-201ENST00000578045 78 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 AL590229.1-201ENST00000603497 542 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 RNU7-56P-201ENST00000458744 62 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 SCARNA18-201ENST00000459004 134 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 AC048334.1-201ENST00000477975 159 ntBASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-0.29□□□□□ -2.46
VPS13DQ5THJ4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 RNU6-747P-201ENST00000390928 104 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 RNA5SP109-201ENST00000391010 116 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 RNU6-241P-201ENST00000391148 104 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 SNORA75.3-201ENST00000391231 150 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 RNA5SP222-201ENST00000411039 105 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 AL161935.2-201ENST00000414627 60 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 MTCO3P5-201ENST00000433620 714 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 AL008629.1-201ENST00000438615 184 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 RPS26P48-201ENST00000491713 339 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 RNU5A-7P-201ENST00000515979 116 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 RNU2-12P-201ENST00000517216 168 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 AC109329.1-201ENST00000518744 317 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 MIR4743-201ENST00000584576 69 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 AC024581.2-201ENST00000619986 252 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 uc_338.16-201ENST00000621804 95 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 AC119674.1-220ENST00000641502 1048 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 SNORD114-3-201ENST00000364969 75 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 TAAR7P-201ENST00000436141 242 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 VPS26AP1-201ENST00000483197 979 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 PTK2-220ENST00000520151 573 ntTSL 4 BASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 AL355297.3-201ENST00000604082 446 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 AL592221.1-201ENST00000605266 382 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 AC011921.3-201ENST00000605540 361 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 MIR1207-201ENST00000408249 87 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 NDUFA5P10-201ENST00000432147 357 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 PTGES3P1-201ENST00000439531 483 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 AP001324.2-201ENST00000461163 319 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 SNRPGP20-201ENST00000604477 205 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 AL133445.2-201ENST00000611191 527 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 AC104985.3-201ENST00000623479 597 ntBASIC-0.3□□□□□ -2.46
VPS13DQ5THJ4 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms