Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
CCDC58Q4VC31 AC105758.1-201ENST00000506038 399 ntBASIC0.12□□□□□ -2.39
CCDC58Q4VC31 AC022493.2-201ENST00000506122 481 ntBASIC0.12□□□□□ -2.39
CCDC58Q4VC31 SNORA76.2-201ENST00000517095 137 ntBASIC0.12□□□□□ -2.39
CCDC58Q4VC31 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.12□□□□□ -2.39
CCDC58Q4VC31 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.12□□□□□ -2.39
CCDC58Q4VC31 OR6C7P-201ENST00000547875 934 ntBASIC0.12□□□□□ -2.39
CCDC58Q4VC31 ZNF971P-201ENST00000562068 1249 ntBASIC0.12□□□□□ -2.39
CCDC58Q4VC31 AC025678.1-201ENST00000567861 338 ntBASIC0.12□□□□□ -2.39
CCDC58Q4VC31 BNIP3P9-201ENST00000603714 553 ntBASIC0.12□□□□□ -2.39
CCDC58Q4VC31 AC242852.1-201ENST00000612151 96 ntBASIC0.12□□□□□ -2.39
CCDC58Q4VC31 AC244015.1-201ENST00000622301 99 ntBASIC0.12□□□□□ -2.39
CCDC58Q4VC31 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.12□□□□□ -2.39
CCDC58Q4VC31 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.12□□□□□ -2.39
CCDC58Q4VC31 Y_RNA.191-201ENST00000363972 113 ntBASIC0.11□□□□□ -2.39
CCDC58Q4VC31 RNU6-932P-201ENST00000391108 106 ntBASIC0.11□□□□□ -2.39
CCDC58Q4VC31 ARL5AP1-201ENST00000418991 388 ntBASIC0.11□□□□□ -2.39
CCDC58Q4VC31 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.11□□□□□ -2.39
CCDC58Q4VC31 RNU7-136P-201ENST00000458819 69 ntBASIC0.11□□□□□ -2.39
CCDC58Q4VC31 RPL39P36-201ENST00000490784 156 ntBASIC0.11□□□□□ -2.39
CCDC58Q4VC31 AC024589.1-201ENST00000512207 263 ntBASIC0.11□□□□□ -2.39
CCDC58Q4VC31 SNORA68.3-201ENST00000515906 83 ntBASIC0.11□□□□□ -2.39
CCDC58Q4VC31 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
CCDC58Q4VC31 KC877982.1-201ENST00000602313 470 ntBASIC0.11□□□□□ -2.39
CCDC58Q4VC31 AP002906.1-201ENST00000603405 233 ntBASIC0.11□□□□□ -2.39
CCDC58Q4VC31 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.11□□□□□ -2.39
CCDC58Q4VC31 AC092106.3-201ENST00000611308 722 ntBASIC0.11□□□□□ -2.39
CCDC58Q4VC31 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.1□□□□□ -2.39
CCDC58Q4VC31 SNORD3E-201ENST00000362899 217 ntBASIC0.1□□□□□ -2.39
CCDC58Q4VC31 RNU6-952P-201ENST00000391164 108 ntBASIC0.1□□□□□ -2.39
CCDC58Q4VC31 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
CCDC58Q4VC31 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.1□□□□□ -2.39
CCDC58Q4VC31 RPS3AP37-201ENST00000419176 745 ntBASIC0.1□□□□□ -2.39
CCDC58Q4VC31 USP9YP14-201ENST00000430663 563 ntBASIC0.1□□□□□ -2.39
CCDC58Q4VC31 ELOCP30-201ENST00000447108 299 ntBASIC0.1□□□□□ -2.39
CCDC58Q4VC31 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.1□□□□□ -2.39
CCDC58Q4VC31 AC010587.2-201ENST00000511727 448 ntBASIC0.1□□□□□ -2.39
CCDC58Q4VC31 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.1□□□□□ -2.39
CCDC58Q4VC31 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.1□□□□□ -2.39
CCDC58Q4VC31 MIR4452-201ENST00000583004 71 ntBASIC0.1□□□□□ -2.39
CCDC58Q4VC31 AC012557.2-201ENST00000605919 418 ntBASIC0.1□□□□□ -2.39
CCDC58Q4VC31 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.1□□□□□ -2.39
CCDC58Q4VC31 AC021506.2-201ENST00000612354 169 ntBASIC0.1□□□□□ -2.39
CCDC58Q4VC31 AL159153.1-201ENST00000619688 317 ntBASIC0.1□□□□□ -2.39
CCDC58Q4VC31 AC007792.1-201ENST00000623023 402 ntBASIC0.1□□□□□ -2.39
CCDC58Q4VC31 SNORD3E-202ENST00000627253 216 ntBASIC0.1□□□□□ -2.39
CCDC58Q4VC31 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.09□□□□□ -2.39
CCDC58Q4VC31 MIRLET7D-201ENST00000362263 87 ntBASIC0.09□□□□□ -2.4
CCDC58Q4VC31 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.09□□□□□ -2.4
CCDC58Q4VC31 AC011233.1-201ENST00000422812 283 ntBASIC0.09□□□□□ -2.4
CCDC58Q4VC31 FABP5P4-201ENST00000437203 171 ntBASIC0.09□□□□□ -2.4
CCDC58Q4VC31 AC073910.1-201ENST00000445047 438 ntBASIC0.09□□□□□ -2.4
CCDC58Q4VC31 AL606662.1-201ENST00000445763 553 ntBASIC0.09□□□□□ -2.4
CCDC58Q4VC31 AC091435.1-201ENST00000505442 584 ntBASIC0.09□□□□□ -2.4
CCDC58Q4VC31 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.09□□□□□ -2.4
CCDC58Q4VC31 AC023632.1-201ENST00000518463 375 ntBASIC0.09□□□□□ -2.4
CCDC58Q4VC31 AL133153.1-201ENST00000557756 303 ntBASIC0.09□□□□□ -2.4
CCDC58Q4VC31 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.09□□□□□ -2.4
CCDC58Q4VC31 HMGN1P30-201ENST00000589286 268 ntBASIC0.09□□□□□ -2.4
CCDC58Q4VC31 AL031281.1-201ENST00000604049 488 ntBASIC0.09□□□□□ -2.4
CCDC58Q4VC31 AL359757.2-201ENST00000624309 274 ntBASIC0.09□□□□□ -2.4
CCDC58Q4VC31 RNU1-96P-201ENST00000364163 162 ntBASIC0.08□□□□□ -2.4
CCDC58Q4VC31 RNU1-133P-201ENST00000364867 167 ntBASIC0.08□□□□□ -2.4
CCDC58Q4VC31 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.08□□□□□ -2.4
CCDC58Q4VC31 TAF9P1-201ENST00000445421 515 ntBASIC0.08□□□□□ -2.4
CCDC58Q4VC31 AC003071.1-201ENST00000451219 789 ntBASIC0.08□□□□□ -2.4
CCDC58Q4VC31 TAF9P2-201ENST00000454958 515 ntBASIC0.08□□□□□ -2.4
CCDC58Q4VC31 AC108740.1-201ENST00000498629 225 ntBASIC0.08□□□□□ -2.4
CCDC58Q4VC31 MIR449C-201ENST00000516047 92 ntBASIC0.08□□□□□ -2.4
CCDC58Q4VC31 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.08□□□□□ -2.4
CCDC58Q4VC31 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.08□□□□□ -2.4
CCDC58Q4VC31 SNRPGP1-201ENST00000553864 222 ntBASIC0.08□□□□□ -2.4
CCDC58Q4VC31 AC068620.3-201ENST00000602749 560 ntBASIC0.08□□□□□ -2.4
CCDC58Q4VC31 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
CCDC58Q4VC31 SNORD32B-201ENST00000364460 84 ntBASIC0.07□□□□□ -2.4
CCDC58Q4VC31 RNU6-1327P-201ENST00000365302 105 ntBASIC0.07□□□□□ -2.4
CCDC58Q4VC31 SNORA4.2-201ENST00000365313 147 ntBASIC0.07□□□□□ -2.4
CCDC58Q4VC31 RNU6-950P-201ENST00000384651 107 ntBASIC0.07□□□□□ -2.4
CCDC58Q4VC31 MIR301A-201ENST00000385261 86 ntBASIC0.07□□□□□ -2.4
CCDC58Q4VC31 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
CCDC58Q4VC31 MIR936-201ENST00000401264 98 ntBASIC0.07□□□□□ -2.4
CCDC58Q4VC31 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
CCDC58Q4VC31 RNA5SP193-201ENST00000410353 107 ntBASIC0.07□□□□□ -2.4
CCDC58Q4VC31 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.07□□□□□ -2.4
CCDC58Q4VC31 AL590623.1-201ENST00000427864 105 ntBASIC0.07□□□□□ -2.4
CCDC58Q4VC31 AL121578.1-201ENST00000428051 892 ntBASIC0.07□□□□□ -2.4
CCDC58Q4VC31 MTND2P20-201ENST00000440805 661 ntBASIC0.07□□□□□ -2.4
CCDC58Q4VC31 RPEP5-201ENST00000441137 268 ntBASIC0.07□□□□□ -2.4
CCDC58Q4VC31 AL162395.1-201ENST00000457882 422 ntBASIC0.07□□□□□ -2.4
CCDC58Q4VC31 RPS26P48-201ENST00000491713 339 ntBASIC0.07□□□□□ -2.4
CCDC58Q4VC31 SUMO2P16-201ENST00000519475 264 ntBASIC0.07□□□□□ -2.4
CCDC58Q4VC31 AC060771.1-201ENST00000582031 164 ntBASIC0.07□□□□□ -2.4
CCDC58Q4VC31 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.07□□□□□ -2.4
CCDC58Q4VC31 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.07□□□□□ -2.4
CCDC58Q4VC31 AL512643.1-201ENST00000635735 524 ntBASIC0.07□□□□□ -2.4
CCDC58Q4VC31 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
CCDC58Q4VC31 MTCO1P21-201ENST00000416634 589 ntBASIC0.06□□□□□ -2.4
CCDC58Q4VC31 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.06□□□□□ -2.4
CCDC58Q4VC31 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.06□□□□□ -2.4
CCDC58Q4VC31 RNU7-34P-201ENST00000459394 64 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms